PlantSME Plant secondary metabolism enzyme database

Raddia guianensis (raddia_guianensis)

Imported from atlas release summary for Raddia guianensis.

1868
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 487 19 UGT (181) View species results
Phenylpropanoid pathway 423 11 POD (182) View species results
Alkaloid pathway 403 23 7DLGT (93) View species results
Flavonoid pathway 273 13 UFGT (153) View species results
Rosmarinic acid pathway 187 7 C4H (78) View species results
Steroid pathway 95 14 CAS (40) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1701 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 282 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T16H
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Gene Pathway Family Confidence Status
Rgu000849 Alkaloid T16H medium borderline
Rgu000920 Alkaloid T16H medium pass
Rgu001491 Alkaloid T16H low borderline
Rgu002405 Alkaloid T16H medium borderline
Rgu003062 Alkaloid T16H medium borderline
Rgu003336 Alkaloid T16H medium borderline
Rgu003366 Alkaloid T16H medium borderline
Rgu003367 Alkaloid T16H medium borderline
Rgu004463 Alkaloid T16H medium borderline
Rgu004734 Alkaloid T16H medium borderline
Rgu004941 Alkaloid T16H medium borderline
Rgu005195 Alkaloid T16H medium borderline
Rgu005308 Alkaloid T16H medium borderline
Rgu007457 Alkaloid T16H low borderline
Rgu008468 Alkaloid T16H medium borderline
Rgu009591 Alkaloid T16H low borderline
Rgu010649 Alkaloid T16H medium borderline
Rgu010801 Alkaloid T16H medium borderline
Rgu011177 Alkaloid T16H medium borderline
Rgu011207 Alkaloid T16H medium borderline
Rgu011522 Alkaloid T16H medium borderline
Rgu011928 Alkaloid T16H medium borderline
Rgu012786 Alkaloid T16H medium borderline
Rgu013237 Alkaloid T16H medium borderline
Rgu014400 Alkaloid T16H medium borderline
Rgu016620 Alkaloid T16H low borderline
Rgu017595 Alkaloid T16H low borderline
Rgu019196 Alkaloid T16H medium borderline
Rgu019746 Alkaloid T16H medium borderline
Rgu021114 Alkaloid T16H medium borderline
Rgu022061 Alkaloid T16H medium borderline
Rgu023693 Alkaloid T16H medium borderline