PlantSME Plant secondary metabolism enzyme database

Raddia guianensis (raddia_guianensis)

Imported from atlas release summary for Raddia guianensis.

1868
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 487 19 UGT (181) View species results
Phenylpropanoid pathway 423 11 POD (182) View species results
Alkaloid pathway 403 23 7DLGT (93) View species results
Flavonoid pathway 273 13 UFGT (153) View species results
Rosmarinic acid pathway 187 7 C4H (78) View species results
Steroid pathway 95 14 CAS (40) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1701 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 282 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CCR
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Gene Pathway Family Confidence Status
Rgu001734 Phenylpropanoid CCR medium borderline
Rgu001931 Phenylpropanoid CCR medium borderline
Rgu002066 Phenylpropanoid CCR medium borderline
Rgu002668 Phenylpropanoid CCR medium borderline
Rgu003297 Phenylpropanoid CCR medium borderline
Rgu003624 Phenylpropanoid CCR medium borderline
Rgu004478 Phenylpropanoid CCR medium pass
Rgu004957 Phenylpropanoid CCR low borderline
Rgu006609 Phenylpropanoid CCR medium pass
Rgu007260 Phenylpropanoid CCR medium borderline
Rgu007748 Phenylpropanoid CCR medium borderline
Rgu007853 Phenylpropanoid CCR medium borderline
Rgu008588 Phenylpropanoid CCR medium borderline
Rgu008855 Phenylpropanoid CCR medium borderline
Rgu009117 Phenylpropanoid CCR medium borderline
Rgu009543 Phenylpropanoid CCR medium borderline
Rgu009821 Phenylpropanoid CCR medium borderline
Rgu010625 Phenylpropanoid CCR medium pass
Rgu010800 Phenylpropanoid CCR medium borderline
Rgu012010 Phenylpropanoid CCR medium borderline
Rgu012028 Phenylpropanoid CCR medium borderline
Rgu012029 Phenylpropanoid CCR medium borderline
Rgu012246 Phenylpropanoid CCR medium borderline
Rgu012374 Phenylpropanoid CCR medium borderline
Rgu013277 Phenylpropanoid CCR medium borderline
Rgu013598 Phenylpropanoid CCR low borderline
Rgu013599 Phenylpropanoid CCR medium pass
Rgu014518 Phenylpropanoid CCR medium pass
Rgu016216 Phenylpropanoid CCR medium borderline
Rgu016952 Phenylpropanoid CCR low borderline
Rgu018488 Phenylpropanoid CCR medium pass
Rgu019584 Phenylpropanoid CCR medium pass
Rgu021670 Phenylpropanoid CCR medium borderline
Rgu022267 Phenylpropanoid CCR medium pass
Rgu024007 Phenylpropanoid CCR medium borderline