Raddia guianensis (raddia_guianensis)
Imported from atlas release summary for Raddia guianensis.
1868
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
- This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
- If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
- Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Pathway Coverage
6
Pathways
Family Distribution
1868
Candidate Genes
C4H
7.13%
C3'H/CYP98A
5.83%
4CL
5.38%
BAHD
5.06%
UGT
4.57%
POD
4.5%
7DLGT
3.96%
UFGT
3.73%
Other Families
59.85%
More Families (97)
T3O
151
3.52%
CYP76
148
3.45%
IFS
131
3.05%
F3'H/CYP75B
123
2.87%
DWF4/CYP90B1
101
2.35%
BR6OX2/CYP85A2
99
2.31%
CYP71
86
2.0%
F3H
75
1.75%
TRI/TRII
63
1.47%
STR
61
1.42%
NMT
60
1.4%
CAD
57
1.33%
G8O/G8H
55
1.28%
CAS
53
1.24%
SMT1/SMT2/SMT3
51
1.19%
H6H
43
1.0%
GS
43
1.0%
COMT
42
0.98%
CODM/T6ODM
41
0.96%
LAC
41
0.96%
SLS
40
0.93%
PYKS
39
0.91%
FNS
38
0.89%
CSE
38
0.89%
ANR
37
0.86%
16OMT
36
0.84%
SGD
35
0.82%
CCR
35
0.82%
TPS
35
0.82%
PMT
33
0.77%
RAS
33
0.77%
AACT
33
0.77%
T16H
32
0.75%
HCT
32
0.75%
GES
30
0.7%
PAL
30
0.7%
CYP90D1
26
0.61%
IO
23
0.54%
IFR
22
0.51%
F3'5'H/CYP75A
20
0.47%
F5H/CYP84A
19
0.44%
COR
18
0.42%
CYP51G1
18
0.42%
7DLH
17
0.4%
8HGO
16
0.37%
DFR
16
0.37%
CPD/CYP90A1
16
0.37%
NCS
14
0.33%
BR6OX1/CYP85A1
14
0.33%
CHS
13
0.3%
MPO
12
0.28%
FPPS
12
0.28%
LAMT
11
0.26%
BBE
10
0.23%
ROT3/CYP90C1
10
0.23%
SQS/FDFT1
10
0.23%
CPR
9
0.21%
TAT
9
0.21%
GGPPS
9
0.21%
CYP80B1
8
0.19%
HMGR
8
0.19%
ISY
7
0.16%
TDC
7
0.16%
6OMT_4OMT_SOMT
7
0.16%
ANS/LDOX
7
0.16%
HPPR
7
0.16%
DXS
7
0.16%
CNMT
6
0.14%
TYDC_DDC
6
0.14%
SMO1/SMO2
6
0.14%
CYP719
5
0.12%
CCoAOMT
5
0.12%
HDR/IspH
5
0.12%
XMT_MXMT_DXMT
4
0.09%
ADC
4
0.09%
DWF1
4
0.09%
MCT/IspD
4
0.09%
DXR
4
0.09%
CYP80F1
3
0.07%
CHI
3
0.07%
MDS/IspF
3
0.07%
HMGS
3
0.07%
MVD
3
0.07%
FK
2
0.05%
IDI
2
0.05%
CMK/IspE
2
0.05%
MVK
2
0.05%
ODC
1
0.02%
FLS
1
0.02%
CPI1
1
0.02%
DWF7
1
0.02%
DWF5
1
0.02%
SQE
1
0.02%
DET2
1
0.02%
HYD1
1
0.02%
PMK
1
0.02%
HDS/IspG
1
0.02%
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
| Pathway | Candidate Genes | Families | Top family | Results |
|---|---|---|---|---|
| Terpenoid pathway | 487 | 19 | UGT (181) | View species results |
| Phenylpropanoid pathway | 423 | 11 | POD (182) | View species results |
| Alkaloid pathway | 403 | 23 | 7DLGT (93) | View species results |
| Flavonoid pathway | 273 | 13 | UFGT (153) | View species results |
| Rosmarinic acid pathway | 187 | 7 | C4H (78) | View species results |
| Steroid pathway | 95 | 14 | CAS (40) | View species results |
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
| Catalytic group | Families | Candidate genes | Included families |
|---|---|---|---|
| P450/oxygenase | 24 | 1701 | 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O |
| BAHD/acyltransferase | 3 | 282 | BAHD, HCT, RAS |
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: UGT
| Gene | Pathway | Family | Confidence | Status | Best Target |
|---|---|---|---|---|---|
| Rgu000003 | Terpenoid | UGT | medium | pass | UGT__00038__sp_K4CWS6_U75C1_SOLLC |
| Rgu000048 | Terpenoid | UGT | medium | pass | UGT__00108__sp_Q9SYK9_U74E2_ARATH |
| Rgu000066 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Rgu000134 | Terpenoid | UGT | medium | pass | UGT__00044__sp_K4GIP0_73C12_BARVU |
| Rgu000156 | Terpenoid | UGT | medium | pass | UGT__00001__sp_A0A067YB04_UGT1_PUEML |
| Rgu000259 | Terpenoid | UGT | low | borderline | UGT__00013__sp_A0A172J2D0_UGT2_PUEML |
| Rgu000420 | Terpenoid | UGT | medium | pass | UGT__00037__sp_I1LCI8_FG2KO_SOYBN |
| Rgu000514 | Terpenoid | UGT | medium | pass | UGT__00086__sp_Q9LFJ8_U78D2_ARATH |
| Rgu000874 | Terpenoid | UGT | medium | pass | UGT__00041__sp_K4GGT4_73C11_BARVU |
| Rgu001124 | Terpenoid | UGT | medium | pass | UGT__00030__sp_D3UAG3_U88F2_PYRCO |
| Rgu001167 | Terpenoid | UGT | medium | pass | UGT__00107__sp_Q9SNB1_U7E11_ARATH |
| Rgu001351 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Rgu001472 | Terpenoid | UGT | medium | pass | UGT__00013__sp_A0A172J2D0_UGT2_PUEML |
| Rgu001571 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Rgu001628 | Terpenoid | UGT | medium | pass | UGT__00045__sp_K4GKX2_73C10_BARVU |
| Rgu001629 | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| Rgu001875 | Terpenoid | UGT | medium | pass | UGT__00074__sp_Q7XT97_UGT79_ORYSJ |
| Rgu001876 | Terpenoid | UGT | medium | pass | UGT__00074__sp_Q7XT97_UGT79_ORYSJ |
| Rgu002465 | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| Rgu002827 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Rgu002961 | Terpenoid | UGT | medium | pass | UGT__00082__sp_Q9C9B0_U89B1_ARATH |
| Rgu003011 | Terpenoid | UGT | medium | pass | UGT__00110__sp_Q9ZQ95_U73C6_ARATH |
| Rgu003218 | Terpenoid | UGT | medium | pass | UGT__00076__sp_Q8L7M0_TUN_ARATH |
| Rgu003649 | Terpenoid | UGT | medium | pass | UGT__00030__sp_D3UAG3_U88F2_PYRCO |
| Rgu003795 | Terpenoid | UGT | low | borderline | UGT__00041__sp_K4GGT4_73C11_BARVU |
| Rgu004127 | Terpenoid | UGT | medium | pass | UGT__00108__sp_Q9SYK9_U74E2_ARATH |
| Rgu004177 | Terpenoid | UGT | medium | pass | UGT__00022__sp_B2XBQ5_85A19_PRUDU |
| Rgu004631 | Terpenoid | UGT | medium | pass | UGT__00115__sp_U3U992_UGT8_CATRO |
| Rgu004632 | Terpenoid | UGT | low | borderline | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Rgu004752 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Rgu004937 | Terpenoid | UGT | medium | pass | UGT__00008__sp_A0A0B6VIJ5_F6CGT_GENTR |
| Rgu005220 | Terpenoid | UGT | medium | pass | UGT__00075__sp_Q7Y232_U73B4_ARATH |
| Rgu005354 | Terpenoid | UGT | low | borderline | UGT__00101__sp_Q9LVR1_U72E2_ARATH |
| Rgu005486 | Terpenoid | UGT | medium | pass | UGT__00022__sp_B2XBQ5_85A19_PRUDU |
| Rgu005689 | Terpenoid | UGT | medium | pass | UGT__00076__sp_Q8L7M0_TUN_ARATH |
| Rgu005705 | Terpenoid | UGT | medium | pass | UGT__00024__sp_B3VI56_U91D2_STERE |
| Rgu005974 | Terpenoid | UGT | medium | pass | UGT__00109__sp_Q9ZQ94_U73C5_ARATH |
| Rgu005998 | Terpenoid | UGT | medium | pass | UGT__00068__sp_P0DO75_GT752_SIRGR |
| Rgu006063 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Rgu006064 | Terpenoid | UGT | medium | pass | UGT__00103__sp_Q9M156_U72B1_ARATH |
| Rgu006298 | Terpenoid | UGT | medium | pass | UGT__00081__sp_Q9C768_U76B1_ARATH |
| Rgu006375 | Terpenoid | UGT | medium | pass | UGT__00112__sp_Q9ZQG4_U73B5_ARATH |
| Rgu006687 | Terpenoid | UGT | medium | pass | UGT__00032__sp_F8WKW1_UGT2_GARJA |
| Rgu006800 | Terpenoid | UGT | medium | pass | UGT__00088__sp_Q9LK73_U88A1_ARATH |
| Rgu006814 | Terpenoid | UGT | medium | pass | UGT__00089__sp_Q9LML6_U71C4_ARATH |
| Rgu007054 | Terpenoid | UGT | medium | pass | UGT__00074__sp_Q7XT97_UGT79_ORYSJ |
| Rgu007064 | Terpenoid | UGT | medium | pass | UGT__00034__sp_F8WLS6_UGT6_CATRO |
| Rgu007120 | Terpenoid | UGT | medium | pass | UGT__00081__sp_Q9C768_U76B1_ARATH |
| Rgu007186 | Terpenoid | UGT | medium | pass | UGT__00030__sp_D3UAG3_U88F2_PYRCO |
| Rgu007189 | Terpenoid | UGT | medium | pass | UGT__00001__sp_A0A067YB04_UGT1_PUEML |