PlantSME Plant secondary metabolism enzyme database

Raddia guianensis (raddia_guianensis)

Imported from atlas release summary for Raddia guianensis.

1868
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 487 19 UGT (181) View species results
Phenylpropanoid pathway 423 11 POD (182) View species results
Alkaloid pathway 403 23 7DLGT (93) View species results
Flavonoid pathway 273 13 UFGT (153) View species results
Rosmarinic acid pathway 187 7 C4H (78) View species results
Steroid pathway 95 14 CAS (40) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1701 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 282 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: GES
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Gene Pathway Family Confidence Status Best Target
Rgu001185 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Rgu001921 Alkaloid GES low borderline GES__00010__sp_Q93YV0_GES_ARATH
Rgu002008 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Rgu002009 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Rgu002674 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Rgu002837 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Rgu003853 Alkaloid GES low borderline GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Rgu004324 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Rgu004495 Alkaloid GES medium pass GES__00008__sp_Q84ZW8_ACSS_MAIZE
Rgu004575 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Rgu004949 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Rgu007583 Alkaloid GES low borderline GES__00006__sp_Q4JHG3_GRNLC_PERFH
Rgu007896 Alkaloid GES low borderline GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Rgu007897 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Rgu008910 Alkaloid GES low borderline GES__00010__sp_Q93YV0_GES_ARATH
Rgu012383 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Rgu013621 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Rgu013622 Alkaloid GES medium pass GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Rgu014053 Alkaloid GES medium pass GES__00009__sp_Q8GUE4_GERS_CINTE
Rgu014176 Alkaloid GES low borderline GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Rgu014177 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Rgu014317 Alkaloid GES low borderline GES__00001__sp_A0A7G5KLV3_TPS4_CANOD
Rgu015208 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Rgu015480 Alkaloid GES medium pass GES__00008__sp_Q84ZW8_ACSS_MAIZE
Rgu017007 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Rgu019321 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Rgu019322 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Rgu019973 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Rgu021664 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU
Rgu022496 Alkaloid GES medium pass GES__00004__sp_E2E2N7_BCGS_ORIVU