PlantSME Plant secondary metabolism enzyme database

Raddia guianensis (raddia_guianensis)

Imported from atlas release summary for Raddia guianensis.

1868
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 487 19 UGT (181) View species results
Phenylpropanoid pathway 423 11 POD (182) View species results
Alkaloid pathway 403 23 7DLGT (93) View species results
Flavonoid pathway 273 13 UFGT (153) View species results
Rosmarinic acid pathway 187 7 C4H (78) View species results
Steroid pathway 95 14 CAS (40) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1701 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 282 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PMT
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Gene Pathway Family Confidence Status
Rgu000164 Alkaloid PMT medium pass
Rgu000165 Alkaloid PMT medium pass
Rgu000441 Alkaloid PMT medium pass
Rgu000442 Alkaloid PMT medium pass
Rgu002923 Alkaloid PMT medium pass
Rgu003325 Alkaloid PMT medium borderline
Rgu003327 Alkaloid PMT medium pass
Rgu003434 Alkaloid PMT medium pass
Rgu004012 Alkaloid PMT medium borderline
Rgu007586 Alkaloid PMT low borderline
Rgu007587 Alkaloid PMT low borderline
Rgu008130 Alkaloid PMT low borderline
Rgu008241 Alkaloid PMT medium pass
Rgu008445 Alkaloid PMT low borderline
Rgu011316 Alkaloid PMT medium pass
Rgu011478 Alkaloid PMT medium borderline
Rgu011773 Alkaloid PMT medium pass
Rgu012065 Alkaloid PMT medium pass
Rgu014563 Alkaloid PMT medium pass
Rgu015588 Alkaloid PMT medium pass
Rgu015899 Alkaloid PMT low borderline
Rgu016383 Alkaloid PMT low borderline
Rgu016530 Alkaloid PMT low borderline
Rgu016725 Alkaloid PMT medium pass
Rgu016795 Alkaloid PMT medium pass
Rgu016980 Alkaloid PMT medium pass
Rgu018241 Alkaloid PMT medium pass
Rgu018429 Alkaloid PMT low borderline
Rgu018505 Alkaloid PMT medium pass
Rgu019060 Alkaloid PMT medium pass
Rgu022706 Alkaloid PMT low borderline
Rgu022857 Alkaloid PMT medium pass
Rgu023514 Alkaloid PMT medium pass