PlantSME Plant secondary metabolism enzyme database

Raddia guianensis (raddia_guianensis)

Imported from atlas release summary for Raddia guianensis.

1868
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 487 19 UGT (181) View species results
Phenylpropanoid pathway 423 11 POD (182) View species results
Alkaloid pathway 403 23 7DLGT (93) View species results
Flavonoid pathway 273 13 UFGT (153) View species results
Rosmarinic acid pathway 187 7 C4H (78) View species results
Steroid pathway 95 14 CAS (40) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1701 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 282 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: C4H
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Gene Pathway Family Confidence Status
Rgu000565 Flavonoid C4H low borderline
Rgu003280 Flavonoid C4H medium borderline
Rgu003301 Flavonoid C4H low borderline
Rgu007464 Flavonoid C4H medium borderline
Rgu010526 Flavonoid C4H low borderline
Rgu013790 Flavonoid C4H low borderline
Rgu013926 Flavonoid C4H low borderline
Rgu015082 Flavonoid C4H medium borderline
Rgu015926 Flavonoid C4H low borderline
Rgu016048 Flavonoid C4H low borderline
Rgu017343 Flavonoid C4H medium borderline
Rgu018325 Flavonoid C4H low borderline
Rgu018545 Flavonoid C4H medium borderline
Rgu019616 Flavonoid C4H low borderline
Rgu022061 Flavonoid C4H medium borderline
Rgu023498 Flavonoid C4H medium borderline
Rgu023731 Flavonoid C4H medium borderline
Rgu000093 Rosmarinic Acid C4H medium pass
Rgu000456 Rosmarinic Acid C4H low borderline
Rgu000497 Rosmarinic Acid C4H low borderline
Rgu000565 Rosmarinic Acid C4H low borderline
Rgu000670 Rosmarinic Acid C4H medium pass
Rgu000742 Rosmarinic Acid C4H low borderline
Rgu000789 Rosmarinic Acid C4H medium pass
Rgu000849 Rosmarinic Acid C4H medium pass
Rgu000892 Rosmarinic Acid C4H low borderline
Rgu000920 Rosmarinic Acid C4H low borderline
Rgu001094 Rosmarinic Acid C4H low borderline
Rgu001136 Rosmarinic Acid C4H low borderline
Rgu001144 Rosmarinic Acid C4H medium pass
Rgu001201 Rosmarinic Acid C4H medium pass
Rgu001281 Rosmarinic Acid C4H medium pass
Rgu001385 Rosmarinic Acid C4H medium pass
Rgu001470 Rosmarinic Acid C4H medium pass
Rgu001532 Rosmarinic Acid C4H low borderline
Rgu001559 Rosmarinic Acid C4H low borderline
Rgu001757 Rosmarinic Acid C4H medium pass
Rgu001758 Rosmarinic Acid C4H medium pass
Rgu001954 Rosmarinic Acid C4H low borderline
Rgu001955 Rosmarinic Acid C4H medium pass
Rgu002214 Rosmarinic Acid C4H low borderline
Rgu002405 Rosmarinic Acid C4H low borderline
Rgu002540 Rosmarinic Acid C4H low borderline
Rgu002784 Rosmarinic Acid C4H medium pass
Rgu002876 Rosmarinic Acid C4H low borderline
Rgu002941 Rosmarinic Acid C4H low borderline
Rgu003062 Rosmarinic Acid C4H low borderline
Rgu003070 Rosmarinic Acid C4H low borderline
Rgu003280 Rosmarinic Acid C4H low borderline
Rgu003301 Rosmarinic Acid C4H low borderline