PlantSME Plant secondary metabolism enzyme database

Raddia guianensis (raddia_guianensis)

Imported from atlas release summary for Raddia guianensis.

1868
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 487 19 UGT (181) View species results
Phenylpropanoid pathway 423 11 POD (182) View species results
Alkaloid pathway 403 23 7DLGT (93) View species results
Flavonoid pathway 273 13 UFGT (153) View species results
Rosmarinic acid pathway 187 7 C4H (78) View species results
Steroid pathway 95 14 CAS (40) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1701 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 282 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: F3H
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Gene Pathway Family Confidence Status
Rgu000373 Flavonoid F3H medium borderline
Rgu000409 Flavonoid F3H medium borderline
Rgu000410 Flavonoid F3H medium borderline
Rgu000613 Flavonoid F3H medium borderline
Rgu000728 Flavonoid F3H medium borderline
Rgu000731 Flavonoid F3H medium borderline
Rgu001500 Flavonoid F3H medium borderline
Rgu001582 Flavonoid F3H low borderline
Rgu001631 Flavonoid F3H medium borderline
Rgu003051 Flavonoid F3H medium borderline
Rgu003568 Flavonoid F3H low borderline
Rgu003580 Flavonoid F3H medium borderline
Rgu003830 Flavonoid F3H medium borderline
Rgu003945 Flavonoid F3H medium borderline
Rgu004109 Flavonoid F3H medium borderline
Rgu005217 Flavonoid F3H low borderline
Rgu005323 Flavonoid F3H medium pass
Rgu005324 Flavonoid F3H medium pass
Rgu005695 Flavonoid F3H medium borderline
Rgu005916 Flavonoid F3H medium borderline
Rgu006305 Flavonoid F3H medium borderline
Rgu006366 Flavonoid F3H medium borderline
Rgu006691 Flavonoid F3H medium borderline
Rgu006758 Flavonoid F3H medium pass
Rgu006897 Flavonoid F3H low borderline
Rgu007096 Flavonoid F3H medium pass
Rgu007097 Flavonoid F3H medium pass
Rgu007228 Flavonoid F3H medium borderline
Rgu007290 Flavonoid F3H medium borderline
Rgu007818 Flavonoid F3H medium borderline
Rgu008089 Flavonoid F3H low borderline
Rgu008339 Flavonoid F3H medium borderline
Rgu008517 Flavonoid F3H medium pass
Rgu008827 Flavonoid F3H medium borderline
Rgu008939 Flavonoid F3H medium borderline
Rgu009092 Flavonoid F3H medium borderline
Rgu009098 Flavonoid F3H medium borderline
Rgu009307 Flavonoid F3H medium borderline
Rgu009362 Flavonoid F3H medium borderline
Rgu009410 Flavonoid F3H medium borderline
Rgu009716 Flavonoid F3H medium borderline
Rgu010255 Flavonoid F3H medium borderline
Rgu010950 Flavonoid F3H low borderline
Rgu011196 Flavonoid F3H medium borderline
Rgu011332 Flavonoid F3H medium pass
Rgu012471 Flavonoid F3H medium borderline
Rgu012569 Flavonoid F3H medium borderline
Rgu012668 Flavonoid F3H medium borderline
Rgu013161 Flavonoid F3H medium pass
Rgu013478 Flavonoid F3H low borderline