PlantSME Plant secondary metabolism enzyme database

Raddia guianensis (raddia_guianensis)

Imported from atlas release summary for Raddia guianensis.

1868
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 487 19 UGT (181) View species results
Phenylpropanoid pathway 423 11 POD (182) View species results
Alkaloid pathway 403 23 7DLGT (93) View species results
Flavonoid pathway 273 13 UFGT (153) View species results
Rosmarinic acid pathway 187 7 C4H (78) View species results
Steroid pathway 95 14 CAS (40) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1701 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 282 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Gene Pathway Family Confidence Status
Rgu000514 Alkaloid 7DLGT high pass
Rgu000874 Alkaloid 7DLGT medium pass
Rgu001124 Alkaloid 7DLGT medium pass
Rgu001167 Alkaloid 7DLGT medium pass
Rgu001351 Alkaloid 7DLGT medium pass
Rgu001472 Alkaloid 7DLGT low borderline
Rgu001628 Alkaloid 7DLGT medium pass
Rgu001875 Alkaloid 7DLGT low borderline
Rgu002465 Alkaloid 7DLGT medium pass
Rgu002827 Alkaloid 7DLGT low borderline
Rgu002961 Alkaloid 7DLGT low borderline
Rgu003011 Alkaloid 7DLGT medium pass
Rgu003649 Alkaloid 7DLGT medium pass
Rgu004127 Alkaloid 7DLGT low borderline
Rgu004177 Alkaloid 7DLGT high pass
Rgu004631 Alkaloid 7DLGT high pass
Rgu004752 Alkaloid 7DLGT high pass
Rgu004937 Alkaloid 7DLGT low borderline
Rgu005220 Alkaloid 7DLGT low borderline
Rgu005354 Alkaloid 7DLGT low borderline
Rgu005486 Alkaloid 7DLGT medium pass
Rgu005705 Alkaloid 7DLGT low borderline
Rgu005974 Alkaloid 7DLGT medium pass
Rgu006063 Alkaloid 7DLGT low borderline
Rgu006064 Alkaloid 7DLGT medium pass
Rgu006298 Alkaloid 7DLGT medium pass
Rgu006375 Alkaloid 7DLGT low borderline
Rgu006687 Alkaloid 7DLGT medium pass
Rgu006800 Alkaloid 7DLGT low borderline
Rgu006814 Alkaloid 7DLGT medium pass
Rgu007054 Alkaloid 7DLGT low borderline
Rgu007064 Alkaloid 7DLGT medium pass
Rgu007120 Alkaloid 7DLGT medium pass
Rgu007186 Alkaloid 7DLGT medium pass
Rgu007189 Alkaloid 7DLGT medium pass
Rgu007222 Alkaloid 7DLGT low borderline
Rgu007279 Alkaloid 7DLGT low borderline
Rgu007502 Alkaloid 7DLGT medium pass
Rgu007649 Alkaloid 7DLGT medium pass
Rgu007705 Alkaloid 7DLGT medium pass
Rgu007844 Alkaloid 7DLGT medium pass
Rgu007986 Alkaloid 7DLGT medium pass
Rgu008014 Alkaloid 7DLGT medium pass
Rgu008113 Alkaloid 7DLGT low borderline
Rgu008123 Alkaloid 7DLGT low borderline
Rgu008124 Alkaloid 7DLGT low borderline
Rgu008266 Alkaloid 7DLGT high pass
Rgu008549 Alkaloid 7DLGT low borderline
Rgu009046 Alkaloid 7DLGT medium pass
Rgu009388 Alkaloid 7DLGT medium pass