PlantSME Plant secondary metabolism enzyme database

Raddia guianensis (raddia_guianensis)

Imported from atlas release summary for Raddia guianensis.

1868
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 487 19 UGT (181) View species results
Phenylpropanoid pathway 423 11 POD (182) View species results
Alkaloid pathway 403 23 7DLGT (93) View species results
Flavonoid pathway 273 13 UFGT (153) View species results
Rosmarinic acid pathway 187 7 C4H (78) View species results
Steroid pathway 95 14 CAS (40) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1701 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 282 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Rgu020975 Rosmarinic Acid 4CL low borderline
Rgu021016 Rosmarinic Acid 4CL low borderline
Rgu021035 Rosmarinic Acid 4CL medium pass
Rgu021063 Rosmarinic Acid 4CL medium pass
Rgu021116 Rosmarinic Acid 4CL medium pass
Rgu021124 Rosmarinic Acid 4CL low borderline
Rgu021488 Rosmarinic Acid 4CL medium pass
Rgu021573 Rosmarinic Acid 4CL medium pass
Rgu021634 Rosmarinic Acid 4CL medium pass
Rgu021651 Rosmarinic Acid 4CL medium pass
Rgu021697 Rosmarinic Acid 4CL medium pass
Rgu021724 Rosmarinic Acid 4CL medium pass
Rgu021989 Rosmarinic Acid 4CL medium pass
Rgu022032 Rosmarinic Acid 4CL medium pass
Rgu022129 Rosmarinic Acid 4CL medium pass
Rgu022183 Rosmarinic Acid 4CL low borderline
Rgu022234 Rosmarinic Acid 4CL medium pass
Rgu022312 Rosmarinic Acid 4CL low borderline
Rgu022803 Rosmarinic Acid 4CL medium pass
Rgu022804 Rosmarinic Acid 4CL medium pass
Rgu022942 Rosmarinic Acid 4CL medium pass
Rgu023628 Rosmarinic Acid 4CL medium pass
Rgu023708 Rosmarinic Acid 4CL medium pass
Rgu023817 Rosmarinic Acid 4CL medium pass
Rgu023826 Rosmarinic Acid 4CL medium pass
Rgu024210 Rosmarinic Acid 4CL medium pass
Rgu024216 Rosmarinic Acid 4CL medium pass
Rgu000093 Rosmarinic Acid C4H medium pass
Rgu000456 Rosmarinic Acid C4H low borderline
Rgu000497 Rosmarinic Acid C4H low borderline
Rgu000565 Rosmarinic Acid C4H low borderline
Rgu000670 Rosmarinic Acid C4H medium pass
Rgu000742 Rosmarinic Acid C4H low borderline
Rgu000789 Rosmarinic Acid C4H medium pass
Rgu000849 Rosmarinic Acid C4H medium pass
Rgu000892 Rosmarinic Acid C4H low borderline
Rgu000920 Rosmarinic Acid C4H low borderline
Rgu001094 Rosmarinic Acid C4H low borderline
Rgu001136 Rosmarinic Acid C4H low borderline
Rgu001144 Rosmarinic Acid C4H medium pass
Rgu001201 Rosmarinic Acid C4H medium pass
Rgu001281 Rosmarinic Acid C4H medium pass
Rgu001385 Rosmarinic Acid C4H medium pass
Rgu001470 Rosmarinic Acid C4H medium pass
Rgu001532 Rosmarinic Acid C4H low borderline
Rgu001559 Rosmarinic Acid C4H low borderline
Rgu001757 Rosmarinic Acid C4H medium pass
Rgu001758 Rosmarinic Acid C4H medium pass
Rgu001954 Rosmarinic Acid C4H low borderline
Rgu001955 Rosmarinic Acid C4H medium pass