PlantSME Plant secondary metabolism enzyme database

Raddia guianensis (raddia_guianensis)

Imported from atlas release summary for Raddia guianensis.

1868
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 487 19 UGT (181) View species results
Phenylpropanoid pathway 423 11 POD (182) View species results
Alkaloid pathway 403 23 7DLGT (93) View species results
Flavonoid pathway 273 13 UFGT (153) View species results
Rosmarinic acid pathway 187 7 C4H (78) View species results
Steroid pathway 95 14 CAS (40) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1701 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 282 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Rgu010800 Flavonoid ANR high pass
Rgu012028 Flavonoid ANR medium borderline
Rgu012246 Flavonoid ANR medium borderline
Rgu012374 Flavonoid ANR medium borderline
Rgu013277 Flavonoid ANR medium borderline
Rgu013598 Flavonoid ANR low borderline
Rgu014128 Flavonoid ANR medium pass
Rgu016013 Flavonoid ANR medium borderline
Rgu016952 Flavonoid ANR low borderline
Rgu017235 Flavonoid ANR medium borderline
Rgu018014 Flavonoid ANR medium borderline
Rgu018488 Flavonoid ANR low borderline
Rgu021670 Flavonoid ANR medium borderline
Rgu022908 Flavonoid ANR low borderline
Rgu006406 Flavonoid ANS/LDOX low borderline
Rgu012797 Flavonoid ANS/LDOX medium pass
Rgu012834 Flavonoid ANS/LDOX medium borderline
Rgu016042 Flavonoid ANS/LDOX medium borderline
Rgu019357 Flavonoid ANS/LDOX medium borderline
Rgu021491 Flavonoid ANS/LDOX medium borderline
Rgu023709 Flavonoid ANS/LDOX medium borderline
Rgu000565 Flavonoid C4H low borderline
Rgu003280 Flavonoid C4H medium borderline
Rgu003301 Flavonoid C4H low borderline
Rgu007464 Flavonoid C4H medium borderline
Rgu010526 Flavonoid C4H low borderline
Rgu013790 Flavonoid C4H low borderline
Rgu013926 Flavonoid C4H low borderline
Rgu015082 Flavonoid C4H medium borderline
Rgu015926 Flavonoid C4H low borderline
Rgu016048 Flavonoid C4H low borderline
Rgu017343 Flavonoid C4H medium borderline
Rgu018325 Flavonoid C4H low borderline
Rgu018545 Flavonoid C4H medium borderline
Rgu019616 Flavonoid C4H low borderline
Rgu022061 Flavonoid C4H medium borderline
Rgu023498 Flavonoid C4H medium borderline
Rgu023731 Flavonoid C4H medium borderline
Rgu011406 Flavonoid CHI medium pass
Rgu017153 Flavonoid CHI medium pass
Rgu021657 Flavonoid CHI medium pass
Rgu002046 Flavonoid CHS medium pass
Rgu006812 Flavonoid CHS medium pass
Rgu006906 Flavonoid CHS medium pass
Rgu010245 Flavonoid CHS medium pass
Rgu010500 Flavonoid CHS medium pass
Rgu011088 Flavonoid CHS medium pass
Rgu011391 Flavonoid CHS medium pass
Rgu011392 Flavonoid CHS medium pass
Rgu013360 Flavonoid CHS medium pass