PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Roff15950213440 Alkaloid H6H low borderline
Roff17530224890 Alkaloid H6H low borderline
Roff17700225770 Alkaloid H6H low borderline
Roff18130232810 Alkaloid H6H low borderline
Roff18590241050 Alkaloid H6H medium borderline
Roff18710242490 Alkaloid H6H medium borderline
Roff19020247040 Alkaloid H6H low borderline
Roff19020247050 Alkaloid H6H low borderline
Roff19500251980 Alkaloid H6H low borderline
Roff20210259880 Alkaloid H6H low borderline
Roff21180274890 Alkaloid H6H medium borderline
Roff21250276400 Alkaloid H6H low borderline
Roff21250276410 Alkaloid H6H low borderline
Roff21530286570 Alkaloid H6H low borderline
Roff22530301990 Alkaloid H6H medium borderline
Roff22560303100 Alkaloid H6H medium pass
Roff24020307690 Alkaloid H6H low borderline
Roff25000331740 Alkaloid H6H low borderline
Roff25260338810 Alkaloid H6H medium pass
Roff25260338840 Alkaloid H6H high pass
Roff25260338850 Alkaloid H6H low borderline
Roff25260338870 Alkaloid H6H low borderline
Roff26910356730 Alkaloid H6H low borderline
Roff29180372610 Alkaloid H6H medium borderline
Roff3562350402820 Alkaloid H6H medium borderline
Roff3650330410450 Alkaloid H6H medium borderline
Roff3720390417870 Alkaloid H6H low borderline
Roff3770210426310 Alkaloid H6H low borderline
Roff3798310431340 Alkaloid H6H low borderline
Roff3858720445940 Alkaloid H6H medium borderline
Roff10160004550 Alkaloid IO medium borderline
Roff10170013210 Alkaloid IO medium borderline
Roff10350049720 Alkaloid IO low borderline
Roff10420052150 Alkaloid IO low borderline
Roff10590072470 Alkaloid IO low borderline
Roff11530108450 Alkaloid IO medium borderline
Roff11530113970 Alkaloid IO low borderline
Roff12370135130 Alkaloid IO medium borderline
Roff13310164590 Alkaloid IO medium borderline
Roff13940174270 Alkaloid IO low borderline
Roff14290178340 Alkaloid IO low borderline
Roff14410185270 Alkaloid IO low borderline
Roff14410185290 Alkaloid IO low borderline
Roff14410185300 Alkaloid IO low borderline
Roff15410203600 Alkaloid IO medium borderline
Roff15410203610 Alkaloid IO medium borderline
Roff20060258210 Alkaloid IO low borderline
Roff20850269600 Alkaloid IO low borderline
Roff21350280820 Alkaloid IO medium borderline
Roff21580287620 Alkaloid IO low borderline