PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Roff21810292180 Alkaloid IO medium borderline
Roff24020306960 Alkaloid IO low borderline
Roff28570368800 Alkaloid IO medium borderline
Roff3155650379600 Alkaloid IO low borderline
Roff3265680383210 Alkaloid IO medium borderline
Roff3338840388330 Alkaloid IO low borderline
Roff3931510477110 Alkaloid IO low borderline
Roff5661200487350 Alkaloid IO medium borderline
Roff8300513680 Alkaloid IO medium borderline
Roff10300035270 Alkaloid ISY low borderline
Roff10300035280 Alkaloid ISY low borderline
Roff10490062930 Alkaloid ISY low borderline
Roff14320180550 Alkaloid ISY medium pass
Roff14320180560 Alkaloid ISY medium pass
Roff3497650398090 Alkaloid ISY medium pass
Roff8300510500 Alkaloid ISY medium pass
Roff10420051940 Alkaloid LAMT medium borderline
Roff10420055900 Alkaloid LAMT medium borderline
Roff12130128610 Alkaloid LAMT medium borderline
Roff12190129430 Alkaloid LAMT medium borderline
Roff13310161950 Alkaloid LAMT medium borderline
Roff17700227420 Alkaloid LAMT low borderline
Roff17700227440 Alkaloid LAMT medium borderline
Roff17700227450 Alkaloid LAMT medium borderline
Roff17700227460 Alkaloid LAMT medium borderline
Roff17700227470 Alkaloid LAMT medium pass
Roff17700227480 Alkaloid LAMT medium borderline
Roff17700227490 Alkaloid LAMT medium borderline
Roff17870228110 Alkaloid LAMT low borderline
Roff19070247690 Alkaloid LAMT medium borderline
Roff2669510353580 Alkaloid LAMT medium borderline
Roff2669510353590 Alkaloid LAMT medium pass
Roff27430361940 Alkaloid LAMT medium pass
Roff2914680371730 Alkaloid LAMT medium pass
Roff3574820403550 Alkaloid LAMT medium borderline
Roff3591280405380 Alkaloid LAMT medium borderline
Roff8110499050 Alkaloid LAMT low borderline
Roff15910211790 Alkaloid MPO medium pass
Roff17200220010 Alkaloid MPO medium pass
Roff17200220040 Alkaloid MPO medium pass
Roff18860244540 Alkaloid MPO high pass
Roff1971380255380 Alkaloid MPO medium pass
Roff21350279770 Alkaloid MPO medium pass
Roff21350279780 Alkaloid MPO medium pass
Roff21680289110 Alkaloid MPO high pass
Roff21680289120 Alkaloid MPO high pass
Roff27430359960 Alkaloid MPO medium pass
Roff27430359970 Alkaloid MPO medium pass
Roff10300040490 Alkaloid NCS medium borderline
Roff10300041220 Alkaloid NCS medium borderline