PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Roff3811970434180 Terpenoid CYP76 medium borderline
Roff3811970434190 Terpenoid CYP76 medium borderline
Roff3827340436910 Terpenoid CYP76 medium pass
Roff3828530437200 Terpenoid CYP76 medium borderline
Roff3841980440550 Terpenoid CYP76 medium pass
Roff3870510450480 Terpenoid CYP76 low borderline
Roff3879270452990 Terpenoid CYP76 medium pass
Roff3879570453250 Terpenoid CYP76 medium pass
Roff3880740453450 Terpenoid CYP76 medium borderline
Roff3891400457770 Terpenoid CYP76 medium borderline
Roff3891950458560 Terpenoid CYP76 medium borderline
Roff3900160462940 Terpenoid CYP76 medium borderline
Roff3900160462960 Terpenoid CYP76 medium borderline
Roff3900160462970 Terpenoid CYP76 medium borderline
Roff3929580476340 Terpenoid CYP76 low borderline
Roff5661200487350 Terpenoid CYP76 medium borderline
Roff5661200487360 Terpenoid CYP76 medium pass
Roff5661210487380 Terpenoid CYP76 medium borderline
Roff5661210487390 Terpenoid CYP76 medium pass
Roff5851610492350 Terpenoid CYP76 medium borderline
Roff5851620492390 Terpenoid CYP76 medium borderline
Roff5851620492400 Terpenoid CYP76 medium borderline
Roff5851630492410 Terpenoid CYP76 medium pass
Roff5851640492430 Terpenoid CYP76 medium pass
Roff8110495070 Terpenoid CYP76 medium borderline
Roff8110495300 Terpenoid CYP76 low borderline
Roff8110495310 Terpenoid CYP76 low borderline
Roff8110495380 Terpenoid CYP76 medium borderline
Roff8110495390 Terpenoid CYP76 medium borderline
Roff8110495540 Terpenoid CYP76 medium pass
Roff8110495550 Terpenoid CYP76 medium borderline
Roff8110498870 Terpenoid CYP76 medium borderline
Roff8300513680 Terpenoid CYP76 medium pass
Roff15910212420 Terpenoid DXR high pass
Roff24190318520 Terpenoid DXR high pass
Roff10420054020 Terpenoid DXS medium pass
Roff10670082060 Terpenoid DXS medium pass
Roff11790120780 Terpenoid DXS medium pass
Roff11790120790 Terpenoid DXS low borderline
Roff20580264180 Terpenoid DXS medium pass
Roff21180274300 Terpenoid DXS medium pass
Roff21540286930 Terpenoid DXS medium pass
Roff21540286940 Terpenoid DXS medium pass
Roff21540286950 Terpenoid DXS medium pass
Roff24100311380 Terpenoid DXS medium pass
Roff24990331660 Terpenoid DXS medium pass
Roff25260340270 Terpenoid DXS medium pass
Roff25260340280 Terpenoid DXS medium pass
Roff25260340290 Terpenoid DXS medium pass
Roff26260351320 Terpenoid DXS low borderline