PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
Roff10300042000 Terpenoid FPPS medium pass
Roff10510068500 Terpenoid FPPS low borderline
Roff10590074770 Terpenoid FPPS medium pass
Roff10590074780 Terpenoid FPPS low borderline
Roff11030086720 Terpenoid FPPS medium pass
Roff12150129180 Terpenoid FPPS medium pass
Roff15360199790 Terpenoid FPPS medium pass
Roff17220222080 Terpenoid FPPS medium pass
Roff17220222090 Terpenoid FPPS medium pass
Roff17220222100 Terpenoid FPPS medium pass
Roff17220222110 Terpenoid FPPS medium pass
Roff17220222120 Terpenoid FPPS medium pass
Roff17220222130 Terpenoid FPPS medium pass
Roff24190318230 Terpenoid FPPS medium borderline
Roff27430362310 Terpenoid FPPS medium borderline
Roff3720130417820 Terpenoid FPPS medium pass
Roff3888030455950 Terpenoid FPPS medium pass
Roff3890830457150 Terpenoid FPPS medium pass
Roff3916330470140 Terpenoid FPPS low borderline
Roff3944200481310 Terpenoid FPPS medium pass
Roff8110497560 Terpenoid FPPS medium pass
Roff8210500110 Terpenoid FPPS medium pass
Roff8210500120 Terpenoid FPPS medium pass
Roff10290031820 Terpenoid GGPPS medium borderline
Roff10300037000 Terpenoid GGPPS medium borderline
Roff10300037010 Terpenoid GGPPS medium borderline
Roff10300037020 Terpenoid GGPPS medium borderline
Roff10300037030 Terpenoid GGPPS medium borderline
Roff10620081500 Terpenoid GGPPS medium borderline
Roff11030087470 Terpenoid GGPPS medium borderline
Roff11530108920 Terpenoid GGPPS medium borderline
Roff15360202920 Terpenoid GGPPS medium borderline
Roff21690289990 Terpenoid GGPPS medium borderline
Roff26640353440 Terpenoid GGPPS medium borderline
Roff26640353480 Terpenoid GGPPS medium borderline
Roff27760365030 Terpenoid GGPPS medium borderline
Roff3418260391940 Terpenoid GGPPS medium borderline
Roff8110496690 Terpenoid GGPPS medium borderline
Roff8210506410 Terpenoid GGPPS medium borderline
Roff8210506420 Terpenoid GGPPS medium borderline
Roff8210506430 Terpenoid GGPPS medium borderline
Roff8210506440 Terpenoid GGPPS medium borderline
Roff3483000396570 Terpenoid GPPS low borderline
Roff14410185140 Terpenoid HDR/IspH high pass
Roff14410185150 Terpenoid HDR/IspH high pass
Roff3637870408640 Terpenoid HDR/IspH high pass
Roff3637870408650 Terpenoid HDR/IspH high pass
Roff3637870408660 Terpenoid HDR/IspH high pass
Roff10490064320 Terpenoid HDS/IspG high pass
Roff10490064330 Terpenoid HDS/IspG high pass