PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status Best Target
Roff3858070445570 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Roff3867240448670 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Roff3879950453400 Phenylpropanoid HCT medium pass HCT__00001__sp_Q8GSM7_HST_TOBAC
Roff3885760455060 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Roff3892820458920 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Roff3916490470480 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Roff3927450475290 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Roff3931560477130 Phenylpropanoid HCT low borderline HCT__00002__sp_Q9FI78_HST_ARATH
Roff3932240477440 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Roff8110496920 Phenylpropanoid HCT low borderline HCT__00001__sp_Q8GSM7_HST_TOBAC
Roff10230021090 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Roff10240025090 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Roff10300044630 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Roff10490062620 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Roff10490062630 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Roff10490062640 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Roff10510067380 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Roff10510067610 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Roff10590073760 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Roff10910084270 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Roff11310094450 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Roff11520100960 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Roff11530109900 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Roff11890124290 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Roff12110127510 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Roff12500138560 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Roff12500138570 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Roff12550139070 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
Roff12670142340 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Roff12670142350 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Roff12670145910 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Roff12670145930 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Roff14410184720 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Roff15260196780 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Roff15360201160 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Roff18450236800 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Roff19530254050 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Roff19950257190 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Roff19950257200 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
Roff20670267560 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Roff20670267570 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
Roff20880271460 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
Roff21140272600 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Roff21360282900 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Roff21640288490 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Roff21720290350 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Roff21810292310 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Roff22580303440 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Roff22580303450 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Roff24450324080 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH