PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Roff24450324090 Phenylpropanoid LAC medium pass
Roff24450324100 Phenylpropanoid LAC medium pass
Roff24450324110 Phenylpropanoid LAC medium pass
Roff24980331370 Phenylpropanoid LAC low borderline
Roff25210336440 Phenylpropanoid LAC low borderline
Roff2968780375610 Phenylpropanoid LAC medium pass
Roff3397160390730 Phenylpropanoid LAC medium pass
Roff3458750394470 Phenylpropanoid LAC low borderline
Roff3466520395090 Phenylpropanoid LAC medium pass
Roff3507230399400 Phenylpropanoid LAC medium pass
Roff3507230399410 Phenylpropanoid LAC medium pass
Roff3529030400790 Phenylpropanoid LAC medium pass
Roff3557670402340 Phenylpropanoid LAC medium pass
Roff3639500409090 Phenylpropanoid LAC medium pass
Roff3639500409100 Phenylpropanoid LAC medium pass
Roff3669420412110 Phenylpropanoid LAC medium pass
Roff3834760439040 Phenylpropanoid LAC medium pass
Roff3876500451950 Phenylpropanoid LAC medium pass
Roff3908710467150 Phenylpropanoid LAC medium pass
Roff3913610469200 Phenylpropanoid LAC medium pass
Roff8110495710 Phenylpropanoid LAC low borderline
Roff8110495730 Phenylpropanoid LAC medium pass
Roff8110495740 Phenylpropanoid LAC medium pass
Roff8300512060 Phenylpropanoid LAC medium pass
Roff8300513690 Phenylpropanoid LAC medium pass
Roff8300513700 Phenylpropanoid LAC medium pass
Roff8300513710 Phenylpropanoid LAC medium pass
Roff8300513720 Phenylpropanoid LAC medium pass
Roff8300513730 Phenylpropanoid LAC medium pass
Roff11520100730 Phenylpropanoid PAL high pass
Roff12670144380 Phenylpropanoid PAL low borderline
Roff16590215870 Phenylpropanoid PAL high pass
Roff19530253080 Phenylpropanoid PAL high pass
Roff27270358660 Phenylpropanoid PAL high pass
Roff10160007960 Phenylpropanoid POD medium pass
Roff10160009080 Phenylpropanoid POD medium pass
Roff10170010450 Phenylpropanoid POD medium pass
Roff10170013480 Phenylpropanoid POD medium pass
Roff10200017300 Phenylpropanoid POD medium pass
Roff10200018040 Phenylpropanoid POD low borderline
Roff10240023530 Phenylpropanoid POD medium pass
Roff10240025150 Phenylpropanoid POD medium pass
Roff10240025160 Phenylpropanoid POD medium pass
Roff10250026310 Phenylpropanoid POD medium pass
Roff10280031430 Phenylpropanoid POD medium pass
Roff10300040840 Phenylpropanoid POD medium pass
Roff10300042270 Phenylpropanoid POD medium pass
Roff10300045440 Phenylpropanoid POD medium pass
Roff10320046390 Phenylpropanoid POD medium pass
Roff10330047760 Phenylpropanoid POD medium pass