PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Roff10290032380 Rosmarinic Acid C4H low borderline
Roff10290032390 Rosmarinic Acid C4H low borderline
Roff10290032400 Rosmarinic Acid C4H low borderline
Roff10290032410 Rosmarinic Acid C4H low borderline
Roff10290032420 Rosmarinic Acid C4H low borderline
Roff10290032430 Rosmarinic Acid C4H low borderline
Roff10290032440 Rosmarinic Acid C4H low borderline
Roff10290032540 Rosmarinic Acid C4H low borderline
Roff10290032560 Rosmarinic Acid C4H low borderline
Roff10290032570 Rosmarinic Acid C4H low borderline
Roff10300034790 Rosmarinic Acid C4H low borderline
Roff10300043960 Rosmarinic Acid C4H medium pass
Roff10420052140 Rosmarinic Acid C4H low borderline
Roff10420052370 Rosmarinic Acid C4H medium pass
Roff10420052690 Rosmarinic Acid C4H low borderline
Roff10420052760 Rosmarinic Acid C4H medium pass
Roff10420052890 Rosmarinic Acid C4H low borderline
Roff10440058840 Rosmarinic Acid C4H low borderline
Roff10440060430 Rosmarinic Acid C4H low borderline
Roff10490062380 Rosmarinic Acid C4H medium pass
Roff10490062390 Rosmarinic Acid C4H medium pass
Roff10490065330 Rosmarinic Acid C4H medium pass
Roff10490065340 Rosmarinic Acid C4H medium pass
Roff10490065350 Rosmarinic Acid C4H low borderline
Roff10520071110 Rosmarinic Acid C4H low borderline
Roff10590072470 Rosmarinic Acid C4H low borderline
Roff10590075580 Rosmarinic Acid C4H low borderline
Roff10590076240 Rosmarinic Acid C4H medium pass
Roff10590077710 Rosmarinic Acid C4H low borderline
Roff10620081510 Rosmarinic Acid C4H low borderline
Roff10660081850 Rosmarinic Acid C4H low borderline
Roff10860083170 Rosmarinic Acid C4H low borderline
Roff10860083180 Rosmarinic Acid C4H low borderline
Roff10860083190 Rosmarinic Acid C4H low borderline
Roff10860083200 Rosmarinic Acid C4H low borderline
Roff10860083210 Rosmarinic Acid C4H low borderline
Roff10960085060 Rosmarinic Acid C4H low borderline
Roff10960085070 Rosmarinic Acid C4H low borderline
Roff11010086420 Rosmarinic Acid C4H medium pass
Roff11050087880 Rosmarinic Acid C4H low borderline
Roff11470098730 Rosmarinic Acid C4H low borderline
Roff11470099730 Rosmarinic Acid C4H low borderline
Roff11510100090 Rosmarinic Acid C4H low borderline
Roff11530106120 Rosmarinic Acid C4H low borderline
Roff11530107130 Rosmarinic Acid C4H low borderline
Roff11530107140 Rosmarinic Acid C4H low borderline
Roff11530107150 Rosmarinic Acid C4H low borderline
Roff11530107160 Rosmarinic Acid C4H low borderline
Roff11530108450 Rosmarinic Acid C4H low borderline
Roff11530109550 Rosmarinic Acid C4H medium pass