PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Roff11530109560 Rosmarinic Acid C4H low borderline
Roff11640118590 Rosmarinic Acid C4H low borderline
Roff11790121000 Rosmarinic Acid C4H low borderline
Roff11790122140 Rosmarinic Acid C4H low borderline
Roff11910124690 Rosmarinic Acid C4H medium pass
Roff12350133310 Rosmarinic Acid C4H medium pass
Roff12370135130 Rosmarinic Acid C4H medium pass
Roff12430137720 Rosmarinic Acid C4H low borderline
Roff12430137730 Rosmarinic Acid C4H medium pass
Roff12430137760 Rosmarinic Acid C4H medium pass
Roff12430137770 Rosmarinic Acid C4H medium pass
Roff12430137790 Rosmarinic Acid C4H low borderline
Roff12550138810 Rosmarinic Acid C4H low borderline
Roff12550138820 Rosmarinic Acid C4H medium pass
Roff12600140970 Rosmarinic Acid C4H low borderline
Roff12670141960 Rosmarinic Acid C4H medium pass
Roff12670142010 Rosmarinic Acid C4H low borderline
Roff12680146170 Rosmarinic Acid C4H low borderline
Roff12680146180 Rosmarinic Acid C4H low borderline
Roff12730153190 Rosmarinic Acid C4H low borderline
Roff12840156080 Rosmarinic Acid C4H low borderline
Roff12840156090 Rosmarinic Acid C4H low borderline
Roff13060157650 Rosmarinic Acid C4H low borderline
Roff13130158730 Rosmarinic Acid C4H medium pass
Roff13310162300 Rosmarinic Acid C4H low borderline
Roff13310164100 Rosmarinic Acid C4H low borderline
Roff13310164110 Rosmarinic Acid C4H low borderline
Roff13310164120 Rosmarinic Acid C4H low borderline
Roff13310164140 Rosmarinic Acid C4H low borderline
Roff13310164590 Rosmarinic Acid C4H medium pass
Roff13510168790 Rosmarinic Acid C4H low borderline
Roff13940173730 Rosmarinic Acid C4H low borderline
Roff14290178330 Rosmarinic Acid C4H low borderline
Roff14370182680 Rosmarinic Acid C4H medium pass
Roff14370183220 Rosmarinic Acid C4H low borderline
Roff14370183240 Rosmarinic Acid C4H medium pass
Roff14370184520 Rosmarinic Acid C4H low borderline
Roff14430186670 Rosmarinic Acid C4H low borderline
Roff14430187160 Rosmarinic Acid C4H low borderline
Roff14430187170 Rosmarinic Acid C4H low borderline
Roff14430187220 Rosmarinic Acid C4H low borderline
Roff14430187230 Rosmarinic Acid C4H medium pass
Roff14430187240 Rosmarinic Acid C4H low borderline
Roff14510188640 Rosmarinic Acid C4H low borderline
Roff15360200160 Rosmarinic Acid C4H medium pass
Roff15360202760 Rosmarinic Acid C4H medium pass
Roff15360202770 Rosmarinic Acid C4H medium pass
Roff15360202780 Rosmarinic Acid C4H medium pass
Roff15410203600 Rosmarinic Acid C4H low borderline
Roff15410203610 Rosmarinic Acid C4H low borderline