PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Roff12500138610 Alkaloid 8HGO medium borderline
Roff12500138620 Alkaloid 8HGO medium borderline
Roff12500138630 Alkaloid 8HGO medium borderline
Roff12500138640 Alkaloid 8HGO medium borderline
Roff12500138650 Alkaloid 8HGO medium pass
Roff12500138660 Alkaloid 8HGO medium pass
Roff12500138670 Alkaloid 8HGO medium pass
Roff12730149990 Alkaloid 8HGO medium borderline
Roff12880156840 Alkaloid 8HGO medium borderline
Roff12880156850 Alkaloid 8HGO medium borderline
Roff12880156860 Alkaloid 8HGO medium borderline
Roff18820243880 Alkaloid 8HGO low borderline
Roff21350280770 Alkaloid 8HGO medium borderline
Roff21530285930 Alkaloid 8HGO low borderline
Roff21630287750 Alkaloid 8HGO medium borderline
Roff21630287760 Alkaloid 8HGO medium pass
Roff21630287770 Alkaloid 8HGO medium borderline
Roff29140371580 Alkaloid 8HGO medium borderline
Roff3680310413370 Alkaloid 8HGO medium borderline
Roff3896100461070 Alkaloid 8HGO medium borderline
Roff11530109500 Alkaloid ADC medium pass
Roff18440235440 Alkaloid ADC low borderline
Roff21440283790 Alkaloid ADC medium pass
Roff10300036470 Alkaloid BBE medium borderline
Roff10300036480 Alkaloid BBE medium borderline
Roff10300036490 Alkaloid BBE medium borderline
Roff10300036500 Alkaloid BBE medium borderline
Roff10300036510 Alkaloid BBE medium borderline
Roff10300036520 Alkaloid BBE medium borderline
Roff10300036530 Alkaloid BBE medium borderline
Roff11010086340 Alkaloid BBE medium borderline
Roff11010086350 Alkaloid BBE medium borderline
Roff11270093580 Alkaloid BBE low borderline
Roff12500138530 Alkaloid BBE medium borderline
Roff13310163460 Alkaloid BBE medium borderline
Roff15400203310 Alkaloid BBE medium borderline
Roff15400203320 Alkaloid BBE medium borderline
Roff15400203330 Alkaloid BBE medium borderline
Roff19480251060 Alkaloid BBE low borderline
Roff23910306420 Alkaloid BBE medium borderline
Roff25260340880 Alkaloid BBE medium borderline
Roff27430363410 Alkaloid BBE medium borderline
Roff28340367730 Alkaloid BBE medium borderline
Roff3077450376980 Alkaloid BBE medium borderline
Roff3097820377590 Alkaloid BBE medium borderline
Roff3729810419040 Alkaloid BBE medium borderline
Roff3731600419180 Alkaloid BBE medium borderline
Roff3731600419190 Alkaloid BBE medium borderline
Roff3731600419200 Alkaloid BBE medium borderline
Roff3924380473860 Alkaloid BBE medium borderline