PlantSME Plant secondary metabolism enzyme database

Rosmarinus officinalis (rosmarinus_officinalis)

Imported from atlas release summary for Rosmarinus officinalis.

2746
Candidate Protein Records
2162
Pathway-Level Records
5616
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 685 19 BAHD (284) View species results
Phenylpropanoid pathway 437 11 POD (182) View species results
Alkaloid pathway 406 21 NMT (94) View species results
Flavonoid pathway 263 13 UFGT (168) View species results
Rosmarinic acid pathway 234 7 C4H (111) View species results
Steroid pathway 137 14 SMT1/SMT2/SMT3 (48) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2297 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 449 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Roff3924380473870 Alkaloid BBE medium borderline
Roff8210507160 Alkaloid BBE medium borderline
Roff8210507170 Alkaloid BBE medium borderline
Roff8210507180 Alkaloid BBE medium borderline
Roff8210507190 Alkaloid BBE medium borderline
Roff8210507200 Alkaloid BBE medium borderline
Roff8210507210 Alkaloid BBE medium borderline
Roff8210507220 Alkaloid BBE medium borderline
Roff8210507230 Alkaloid BBE medium borderline
Roff8210507240 Alkaloid BBE medium borderline
Roff8210507250 Alkaloid BBE medium borderline
Roff8210507260 Alkaloid BBE medium borderline
Roff8210507270 Alkaloid BBE medium borderline
Roff8210507290 Alkaloid BBE medium borderline
Roff8210507300 Alkaloid BBE medium borderline
Roff8210507310 Alkaloid BBE medium borderline
Roff8210507320 Alkaloid BBE medium borderline
Roff10170011000 Alkaloid CNMT medium borderline
Roff10290032250 Alkaloid CNMT low borderline
Roff10290032260 Alkaloid CNMT low borderline
Roff11010086520 Alkaloid CNMT medium pass
Roff11120090860 Alkaloid CNMT medium borderline
Roff11370094770 Alkaloid CNMT low borderline
Roff13310164030 Alkaloid CNMT low borderline
Roff13310164040 Alkaloid CNMT low borderline
Roff14340181470 Alkaloid CNMT low borderline
Roff14340181480 Alkaloid CNMT low borderline
Roff14340181490 Alkaloid CNMT low borderline
Roff16590216610 Alkaloid CNMT low borderline
Roff16590216620 Alkaloid CNMT low borderline
Roff26060348240 Alkaloid CNMT low borderline
Roff3767320425750 Alkaloid CNMT low borderline
Roff3842700441120 Alkaloid CNMT low borderline
Roff3904570465080 Alkaloid CNMT low borderline
Roff3934860477940 Alkaloid CNMT low borderline
Roff8210499730 Alkaloid CNMT low borderline
Roff10160005120 Alkaloid CODM/T6ODM medium borderline
Roff10160008010 Alkaloid CODM/T6ODM medium borderline
Roff10300037290 Alkaloid CODM/T6ODM medium borderline
Roff10300037720 Alkaloid CODM/T6ODM low borderline
Roff10300044140 Alkaloid CODM/T6ODM medium borderline
Roff10300044150 Alkaloid CODM/T6ODM medium borderline
Roff10510068580 Alkaloid CODM/T6ODM medium borderline
Roff10980085850 Alkaloid CODM/T6ODM medium borderline
Roff11110089830 Alkaloid CODM/T6ODM medium borderline
Roff11300094340 Alkaloid CODM/T6ODM medium borderline
Roff11730120000 Alkaloid CODM/T6ODM medium borderline
Roff12670142520 Alkaloid CODM/T6ODM medium borderline
Roff13310163490 Alkaloid CODM/T6ODM medium borderline
Roff13310165310 Alkaloid CODM/T6ODM medium borderline