PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Svir05G0014430.1 Flavonoid F3H low borderline
Svir05G0014430.2 Flavonoid F3H low borderline
Svir05G0016040.1 Flavonoid F3H medium pass
Svir05G0017170.1 Flavonoid F3H low borderline
Svir05G0020470.1 Flavonoid F3H low borderline
Svir05G0020990.1 Flavonoid F3H low borderline
Svir05G0028410.1 Flavonoid F3H medium borderline
Svir05G0035340.1 Flavonoid F3H medium borderline
Svir05G0035340.2 Flavonoid F3H medium borderline
Svir05G0040560.1 Flavonoid F3H medium borderline
Svir05G0040560.2 Flavonoid F3H medium borderline
Svir05G0040560.3 Flavonoid F3H medium borderline
Svir05G0044290.1 Flavonoid F3H medium borderline
Svir05G0048720.1 Flavonoid F3H medium borderline
Svir05G0049220.1 Flavonoid F3H medium borderline
Svir06G0003020.1 Flavonoid F3H medium borderline
Svir06G0003020.2 Flavonoid F3H medium borderline
Svir06G0021470.1 Flavonoid F3H medium borderline
Svir06G0028460.1 Flavonoid F3H medium borderline
Svir07G0003670.1 Flavonoid F3H medium borderline
Svir07G0003670.2 Flavonoid F3H medium borderline
Svir07G0003670.3 Flavonoid F3H medium borderline
Svir07G0003800.1 Flavonoid F3H medium borderline
Svir07G0012330.1 Flavonoid F3H medium borderline
Svir07G0015410.1 Flavonoid F3H medium pass
Svir07G0015420.1 Flavonoid F3H low borderline
Svir07G0015420.2 Flavonoid F3H low borderline
Svir07G0019260.1 Flavonoid F3H medium borderline
Svir07G0023810.1 Flavonoid F3H medium borderline
Svir07G0023830.1 Flavonoid F3H medium borderline
Svir07G0029290.1 Flavonoid F3H medium borderline
Svir07G0029290.2 Flavonoid F3H medium borderline
Svir07G0030390.1 Flavonoid F3H medium pass
Svir08G0005970.1 Flavonoid F3H low borderline
Svir08G0007270.1 Flavonoid F3H medium borderline
Svir08G0010410.1 Flavonoid F3H medium borderline
Svir08G0011050.1 Flavonoid F3H medium borderline
Svir08G0015630.1 Flavonoid F3H low borderline
Svir09G0000490.1 Flavonoid F3H medium borderline
Svir09G0000490.2 Flavonoid F3H medium borderline
Svir09G0000490.3 Flavonoid F3H medium borderline
Svir09G0000490.4 Flavonoid F3H medium borderline
Svir09G0000490.5 Flavonoid F3H medium borderline
Svir09G0000560.1 Flavonoid F3H medium borderline
Svir09G0018270.1 Flavonoid F3H medium borderline
Svir09G0018280.1 Flavonoid F3H medium borderline
Svir09G0022930.1 Flavonoid F3H medium pass
Svir09G0036330.1 Flavonoid F3H medium borderline
Svir09G0036330.2 Flavonoid F3H medium borderline
Svir09G0036330.3 Flavonoid F3H medium borderline