PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Svir03G0005530.3 Flavonoid F3H medium borderline
Svir03G0005530.4 Flavonoid F3H medium borderline
Svir03G0008520.1 Flavonoid F3H low borderline
Svir03G0008520.2 Flavonoid F3H medium borderline
Svir03G0008520.3 Flavonoid F3H low borderline
Svir03G0008520.4 Flavonoid F3H low borderline
Svir03G0010120.1 Flavonoid F3H medium borderline
Svir03G0010130.1 Flavonoid F3H medium borderline
Svir03G0010140.1 Flavonoid F3H medium borderline
Svir03G0010150.1 Flavonoid F3H medium borderline
Svir03G0011600.1 Flavonoid F3H medium borderline
Svir03G0016300.1 Flavonoid F3H medium borderline
Svir03G0019940.1 Flavonoid F3H medium borderline
Svir03G0024990.1 Flavonoid F3H medium borderline
Svir03G0024990.2 Flavonoid F3H medium borderline
Svir03G0024990.3 Flavonoid F3H medium borderline
Svir03G0026090.1 Flavonoid F3H medium pass
Svir03G0035250.2 Flavonoid F3H medium borderline
Svir03G0035250.3 Flavonoid F3H medium borderline
Svir03G0039390.1 Flavonoid F3H medium borderline
Svir03G0039720.1 Flavonoid F3H low borderline
Svir03G0039800.1 Flavonoid F3H medium borderline
Svir04G0001780.1 Flavonoid F3H low borderline
Svir04G0001950.1 Flavonoid F3H medium borderline
Svir04G0004840.1 Flavonoid F3H medium pass
Svir04G0004950.1 Flavonoid F3H medium borderline
Svir04G0004950.2 Flavonoid F3H medium borderline
Svir04G0004950.3 Flavonoid F3H medium borderline
Svir04G0004950.4 Flavonoid F3H medium borderline
Svir04G0005880.1 Flavonoid F3H medium borderline
Svir04G0005890.1 Flavonoid F3H medium borderline
Svir04G0005920.1 Flavonoid F3H medium borderline
Svir04G0005950.1 Flavonoid F3H medium borderline
Svir04G0005960.1 Flavonoid F3H medium pass
Svir04G0005970.1 Flavonoid F3H low borderline
Svir04G0006460.1 Flavonoid F3H medium borderline
Svir04G0006890.1 Flavonoid F3H medium borderline
Svir04G0009260.1 Flavonoid F3H medium borderline
Svir04G0012430.1 Flavonoid F3H medium borderline
Svir04G0012760.1 Flavonoid F3H low borderline
Svir04G0026670.1 Flavonoid F3H medium borderline
Svir04G0028710.1 Flavonoid F3H low borderline
Svir05G0002930.1 Flavonoid F3H medium borderline
Svir05G0002930.2 Flavonoid F3H medium borderline
Svir05G0002930.3 Flavonoid F3H medium borderline
Svir05G0002940.1 Flavonoid F3H medium borderline
Svir05G0002940.2 Flavonoid F3H medium borderline
Svir05G0013420.1 Flavonoid F3H medium borderline
Svir05G0013420.2 Flavonoid F3H medium borderline
Svir05G0014000.1 Flavonoid F3H medium borderline