PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

2604
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Svir09G0059170.1 Flavonoid 4CL medium pass
Svir09G0059170.2 Flavonoid 4CL medium pass
Svir09G0059170.3 Flavonoid 4CL medium pass
Svir09G0060590.1 Flavonoid 4CL medium pass
Svir09G0060590.2 Flavonoid 4CL medium pass
Svir09G0060600.1 Flavonoid 4CL medium pass
Svir09G0060620.1 Flavonoid 4CL medium pass
Svir09G0060730.1 Flavonoid 4CL medium pass
Svir09G0060940.1 Flavonoid 4CL medium pass
Svir02G0014970.1 Flavonoid ANR medium borderline
Svir02G0014970.2 Flavonoid ANR medium borderline
Svir02G0029150.1 Flavonoid ANR high pass
Svir02G0029190.1 Flavonoid ANR medium borderline
Svir02G0029190.2 Flavonoid ANR medium borderline
Svir02G0029190.3 Flavonoid ANR medium borderline
Svir02G0029200.1 Flavonoid ANR medium pass
Svir02G0029220.1 Flavonoid ANR medium borderline
Svir02G0029230.1 Flavonoid ANR high pass
Svir02G0042560.1 Flavonoid ANR medium pass
Svir02G0042580.1 Flavonoid ANR medium borderline
Svir02G0042580.3 Flavonoid ANR medium pass
Svir04G0003450.1 Flavonoid ANR medium borderline
Svir04G0003450.2 Flavonoid ANR medium borderline
Svir04G0003450.3 Flavonoid ANR medium borderline
Svir04G0005250.1 Flavonoid ANR medium borderline
Svir04G0022130.1 Flavonoid ANR medium borderline
Svir04G0022140.1 Flavonoid ANR medium pass
Svir04G0023940.1 Flavonoid ANR medium borderline
Svir04G0023970.1 Flavonoid ANR medium borderline
Svir04G0023970.2 Flavonoid ANR medium borderline
Svir04G0023980.1 Flavonoid ANR medium borderline
Svir04G0029350.1 Flavonoid ANR medium borderline
Svir04G0029350.2 Flavonoid ANR medium borderline
Svir05G0003640.1 Flavonoid ANR medium borderline
Svir05G0006210.1 Flavonoid ANR low borderline
Svir05G0019440.1 Flavonoid ANR medium borderline
Svir05G0019440.2 Flavonoid ANR medium borderline
Svir05G0026130.1 Flavonoid ANR medium borderline
Svir05G0026330.1 Flavonoid ANR low borderline
Svir05G0026330.4 Flavonoid ANR low borderline
Svir05G0026330.5 Flavonoid ANR low borderline
Svir05G0040250.1 Flavonoid ANR medium borderline
Svir05G0040250.2 Flavonoid ANR medium borderline
Svir05G0040260.1 Flavonoid ANR medium borderline
Svir05G0040270.1 Flavonoid ANR medium borderline
Svir06G0004570.1 Flavonoid ANR medium borderline
Svir06G0004570.2 Flavonoid ANR medium borderline
Svir06G0004570.3 Flavonoid ANR medium borderline
Svir06G0012280.1 Flavonoid ANR medium borderline
Svir07G0028140.1 Flavonoid ANR medium borderline