PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

2604
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Svir07G0028150.1 Flavonoid ANR medium borderline
Svir07G0028150.2 Flavonoid ANR medium borderline
Svir07G0028160.1 Flavonoid ANR medium borderline
Svir07G0028160.2 Flavonoid ANR medium borderline
Svir07G0028180.1 Flavonoid ANR medium borderline
Svir07G0028190.1 Flavonoid ANR medium borderline
Svir07G0028200.1 Flavonoid ANR medium borderline
Svir07G0028210.1 Flavonoid ANR medium borderline
Svir08G0011080.1 Flavonoid ANR high pass
Svir09G0003870.1 Flavonoid ANR medium borderline
Svir09G0003870.2 Flavonoid ANR medium borderline
Svir09G0003900.1 Flavonoid ANR medium borderline
Svir09G0004060.1 Flavonoid ANR medium borderline
Svir09G0032950.1 Flavonoid ANR low borderline
Svir09G0032950.2 Flavonoid ANR low borderline
Svir09G0034540.1 Flavonoid ANR low borderline
Svir09G0041180.1 Flavonoid ANR low borderline
Svir09G0041220.1 Flavonoid ANR low borderline
Svir09G0041230.1 Flavonoid ANR low borderline
Svir09G0041230.2 Flavonoid ANR low borderline
Svir09G0041230.3 Flavonoid ANR low borderline
Svir09G0041230.4 Flavonoid ANR low borderline
Svir09G0041230.5 Flavonoid ANR low borderline
Svir09G0041230.6 Flavonoid ANR low borderline
Svir09G0041230.7 Flavonoid ANR low borderline
Svir03G0035250.1 Flavonoid ANS/LDOX medium borderline
Svir03G0039740.1 Flavonoid ANS/LDOX medium borderline
Svir03G0039770.1 Flavonoid ANS/LDOX medium borderline
Svir04G0005900.1 Flavonoid ANS/LDOX low borderline
Svir04G0005910.1 Flavonoid ANS/LDOX medium pass
Svir07G0009310.1 Flavonoid ANS/LDOX medium borderline
Svir07G0029300.1 Flavonoid ANS/LDOX medium borderline
Svir09G0027580.1 Flavonoid ANS/LDOX medium borderline
Svir09G0040910.1 Flavonoid ANS/LDOX medium borderline
Svir01G0040970.1 Flavonoid C4H medium borderline
Svir02G0046270.1 Flavonoid C4H medium borderline
Svir03G0019860.1 Flavonoid C4H low borderline
Svir03G0019890.3 Flavonoid C4H medium borderline
Svir05G0031150.1 Flavonoid C4H medium borderline
Svir05G0031150.2 Flavonoid C4H medium borderline
Svir05G0031170.1 Flavonoid C4H medium borderline
Svir05G0031170.2 Flavonoid C4H medium borderline
Svir05G0039650.1 Flavonoid C4H medium borderline
Svir09G0009250.1 Flavonoid C4H low borderline
Svir02G0040510.1 Flavonoid CHI medium pass
Svir03G0012150.1 Flavonoid CHI medium pass
Svir07G0034130.1 Flavonoid CHI medium pass
Svir08G0001600.1 Flavonoid CHI medium pass
Svir09G0003660.1 Flavonoid CHI medium pass
Svir01G0004630.1 Flavonoid CHS low borderline