PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Svir08G0014580.1 Alkaloid T16H medium borderline
Svir08G0015870.1 Alkaloid T16H medium borderline
Svir08G0017610.1 Alkaloid T16H medium borderline
Svir08G0019130.1 Alkaloid T16H low borderline
Svir08G0027270.1 Alkaloid T16H medium borderline
Svir08G0027430.1 Alkaloid T16H medium borderline
Svir08G0027460.1 Alkaloid T16H medium borderline
Svir09G0001260.1 Alkaloid T16H medium borderline
Svir09G0001290.1 Alkaloid T16H medium borderline
Svir09G0014160.1 Alkaloid T16H medium borderline
Svir09G0021270.1 Alkaloid T16H medium borderline
Svir09G0032880.1 Alkaloid T16H medium borderline
Svir09G0043270.1 Alkaloid T16H medium borderline
Svir09G0043360.1 Alkaloid T16H medium borderline
Svir09G0045030.1 Alkaloid T16H medium borderline
Svir09G0045080.1 Alkaloid T16H medium borderline
Svir09G0053410.1 Alkaloid T16H low borderline
Svir01G0002090.1 Alkaloid T3O medium borderline
Svir01G0003800.8 Alkaloid T3O low borderline
Svir01G0003800.9 Alkaloid T3O low borderline
Svir01G0006440.1 Alkaloid T3O medium borderline
Svir01G0006450.1 Alkaloid T3O medium borderline
Svir01G0006530.1 Alkaloid T3O medium borderline
Svir01G0006540.1 Alkaloid T3O medium borderline
Svir01G0014780.1 Alkaloid T3O medium borderline
Svir01G0017550.1 Alkaloid T3O medium borderline
Svir01G0018610.1 Alkaloid T3O medium borderline
Svir01G0024680.1 Alkaloid T3O medium pass
Svir01G0029740.1 Alkaloid T3O low borderline
Svir01G0030270.1 Alkaloid T3O low borderline
Svir01G0032260.1 Alkaloid T3O medium pass
Svir01G0040890.1 Alkaloid T3O low borderline
Svir01G0040970.1 Alkaloid T3O medium pass
Svir02G0000050.1 Alkaloid T3O medium borderline
Svir02G0004830.1 Alkaloid T3O medium borderline
Svir02G0004850.1 Alkaloid T3O medium borderline
Svir02G0011450.1 Alkaloid T3O medium borderline
Svir02G0011830.1 Alkaloid T3O medium borderline
Svir02G0012520.1 Alkaloid T3O medium borderline
Svir02G0012520.2 Alkaloid T3O medium borderline
Svir02G0012520.3 Alkaloid T3O medium borderline
Svir02G0012520.4 Alkaloid T3O medium borderline
Svir02G0012520.5 Alkaloid T3O medium borderline
Svir02G0016540.2 Alkaloid T3O medium borderline
Svir02G0016560.1 Alkaloid T3O medium borderline
Svir02G0016590.1 Alkaloid T3O medium borderline
Svir02G0016590.2 Alkaloid T3O medium borderline
Svir02G0016590.3 Alkaloid T3O medium borderline
Svir02G0016590.4 Alkaloid T3O medium borderline
Svir02G0019880.1 Alkaloid T3O medium pass