PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Svir02G0022610.1 Alkaloid T3O medium borderline
Svir02G0024990.1 Alkaloid T3O medium borderline
Svir02G0025000.1 Alkaloid T3O medium borderline
Svir02G0025010.1 Alkaloid T3O medium borderline
Svir02G0025020.1 Alkaloid T3O medium borderline
Svir02G0026210.1 Alkaloid T3O medium pass
Svir02G0032040.1 Alkaloid T3O medium pass
Svir02G0032110.1 Alkaloid T3O medium borderline
Svir02G0037570.1 Alkaloid T3O medium pass
Svir02G0037580.1 Alkaloid T3O medium pass
Svir02G0040870.1 Alkaloid T3O medium borderline
Svir02G0040880.1 Alkaloid T3O medium borderline
Svir02G0043510.1 Alkaloid T3O medium pass
Svir02G0047510.1 Alkaloid T3O medium borderline
Svir02G0047920.1 Alkaloid T3O medium borderline
Svir03G0010470.1 Alkaloid T3O medium pass
Svir03G0011920.1 Alkaloid T3O medium pass
Svir03G0012700.1 Alkaloid T3O medium pass
Svir03G0012700.2 Alkaloid T3O medium pass
Svir03G0012910.1 Alkaloid T3O medium pass
Svir03G0019850.1 Alkaloid T3O medium borderline
Svir03G0019870.1 Alkaloid T3O medium borderline
Svir03G0021470.1 Alkaloid T3O medium borderline
Svir03G0024740.1 Alkaloid T3O low borderline
Svir03G0028700.1 Alkaloid T3O medium pass
Svir03G0033120.1 Alkaloid T3O medium borderline
Svir03G0036550.1 Alkaloid T3O medium borderline
Svir03G0036570.1 Alkaloid T3O medium borderline
Svir03G0037780.1 Alkaloid T3O medium borderline
Svir03G0041480.1 Alkaloid T3O medium borderline
Svir03G0044270.1 Alkaloid T3O medium borderline
Svir04G0000070.1 Alkaloid T3O medium pass
Svir04G0012770.1 Alkaloid T3O medium borderline
Svir04G0017770.1 Alkaloid T3O medium borderline
Svir04G0022850.1 Alkaloid T3O medium borderline
Svir04G0022900.1 Alkaloid T3O medium borderline
Svir04G0022930.1 Alkaloid T3O medium borderline
Svir04G0022950.1 Alkaloid T3O medium borderline
Svir04G0022990.1 Alkaloid T3O medium borderline
Svir04G0024440.1 Alkaloid T3O medium borderline
Svir04G0026950.1 Alkaloid T3O medium borderline
Svir04G0028460.1 Alkaloid T3O medium pass
Svir04G0028460.2 Alkaloid T3O medium pass
Svir05G0001080.1 Alkaloid T3O medium borderline
Svir05G0001080.2 Alkaloid T3O medium borderline
Svir05G0001090.1 Alkaloid T3O medium borderline
Svir05G0001130.1 Alkaloid T3O medium borderline
Svir05G0001160.1 Alkaloid T3O medium borderline
Svir05G0001160.2 Alkaloid T3O medium borderline
Svir05G0009050.1 Alkaloid T3O medium borderline