PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Svir05G0009070.1 Alkaloid T3O medium borderline
Svir05G0009160.1 Alkaloid T3O medium borderline
Svir05G0013700.1 Alkaloid T3O medium borderline
Svir05G0013930.1 Alkaloid T3O medium pass
Svir05G0013940.1 Alkaloid T3O medium pass
Svir05G0015030.1 Alkaloid T3O medium pass
Svir05G0016120.1 Alkaloid T3O low borderline
Svir05G0027340.1 Alkaloid T3O medium borderline
Svir05G0038540.1 Alkaloid T3O medium pass
Svir05G0038570.1 Alkaloid T3O medium pass
Svir05G0038580.1 Alkaloid T3O medium pass
Svir05G0042270.1 Alkaloid T3O low borderline
Svir05G0042320.1 Alkaloid T3O medium borderline
Svir05G0042320.2 Alkaloid T3O medium borderline
Svir05G0042520.1 Alkaloid T3O low borderline
Svir05G0049770.1 Alkaloid T3O low borderline
Svir05G0050340.1 Alkaloid T3O medium borderline
Svir06G0000430.1 Alkaloid T3O medium borderline
Svir06G0000440.1 Alkaloid T3O medium borderline
Svir06G0002400.1 Alkaloid T3O medium borderline
Svir06G0002400.2 Alkaloid T3O medium borderline
Svir06G0006540.1 Alkaloid T3O medium borderline
Svir06G0010190.1 Alkaloid T3O medium pass
Svir06G0011020.1 Alkaloid T3O medium borderline
Svir06G0011890.1 Alkaloid T3O medium borderline
Svir06G0012080.1 Alkaloid T3O medium borderline
Svir06G0017590.1 Alkaloid T3O medium borderline
Svir06G0018180.1 Alkaloid T3O medium borderline
Svir06G0019850.1 Alkaloid T3O medium borderline
Svir06G0020450.1 Alkaloid T3O medium borderline
Svir06G0020470.1 Alkaloid T3O medium borderline
Svir07G0001380.1 Alkaloid T3O medium borderline
Svir07G0001400.1 Alkaloid T3O medium borderline
Svir07G0003680.1 Alkaloid T3O medium borderline
Svir07G0005910.1 Alkaloid T3O medium borderline
Svir07G0008610.1 Alkaloid T3O medium borderline
Svir07G0015030.1 Alkaloid T3O medium pass
Svir07G0016030.1 Alkaloid T3O medium borderline
Svir07G0017460.1 Alkaloid T3O medium borderline
Svir07G0017470.1 Alkaloid T3O medium borderline
Svir07G0017490.1 Alkaloid T3O medium borderline
Svir07G0017500.1 Alkaloid T3O medium borderline
Svir07G0022360.1 Alkaloid T3O low borderline
Svir07G0023140.1 Alkaloid T3O medium pass
Svir07G0023150.1 Alkaloid T3O medium pass
Svir07G0023160.1 Alkaloid T3O medium pass
Svir07G0024170.1 Alkaloid T3O medium borderline
Svir07G0031070.1 Alkaloid T3O medium borderline
Svir07G0031390.1 Alkaloid T3O medium borderline
Svir07G0034370.1 Alkaloid T3O medium pass