PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Svir07G0035510.1 Alkaloid T3O low borderline
Svir07G0035840.1 Alkaloid T3O medium pass
Svir08G0000360.1 Alkaloid T3O medium pass
Svir08G0001390.1 Alkaloid T3O medium pass
Svir08G0002700.1 Alkaloid T3O low borderline
Svir08G0003010.1 Alkaloid T3O medium pass
Svir08G0007790.1 Alkaloid T3O medium borderline
Svir08G0007820.1 Alkaloid T3O medium borderline
Svir08G0007840.1 Alkaloid T3O medium borderline
Svir08G0010710.1 Alkaloid T3O medium pass
Svir08G0010710.2 Alkaloid T3O medium pass
Svir08G0010710.3 Alkaloid T3O medium pass
Svir08G0010710.4 Alkaloid T3O medium pass
Svir08G0014260.1 Alkaloid T3O medium borderline
Svir08G0015410.1 Alkaloid T3O medium borderline
Svir08G0015410.2 Alkaloid T3O medium borderline
Svir08G0015880.1 Alkaloid T3O medium pass
Svir08G0015940.1 Alkaloid T3O medium pass
Svir08G0019140.1 Alkaloid T3O medium pass
Svir08G0021510.1 Alkaloid T3O medium borderline
Svir08G0023450.1 Alkaloid T3O medium borderline
Svir08G0024070.1 Alkaloid T3O medium borderline
Svir08G0027230.1 Alkaloid T3O medium borderline
Svir08G0027330.1 Alkaloid T3O medium borderline
Svir08G0027350.1 Alkaloid T3O medium borderline
Svir08G0027490.1 Alkaloid T3O medium borderline
Svir09G0001140.1 Alkaloid T3O medium borderline
Svir09G0001150.1 Alkaloid T3O medium borderline
Svir09G0001160.1 Alkaloid T3O medium borderline
Svir09G0001200.1 Alkaloid T3O medium borderline
Svir09G0001210.1 Alkaloid T3O medium borderline
Svir09G0001240.1 Alkaloid T3O medium borderline
Svir09G0001250.1 Alkaloid T3O medium borderline
Svir09G0001270.1 Alkaloid T3O medium borderline
Svir09G0002290.1 Alkaloid T3O medium pass
Svir09G0008670.1 Alkaloid T3O low borderline
Svir09G0009220.1 Alkaloid T3O medium borderline
Svir09G0009230.1 Alkaloid T3O medium borderline
Svir09G0009240.1 Alkaloid T3O medium borderline
Svir09G0010730.1 Alkaloid T3O medium borderline
Svir09G0014260.1 Alkaloid T3O medium borderline
Svir09G0018950.1 Alkaloid T3O medium pass
Svir09G0019290.1 Alkaloid T3O medium borderline
Svir09G0019310.1 Alkaloid T3O medium borderline
Svir09G0020830.1 Alkaloid T3O medium borderline
Svir09G0020840.1 Alkaloid T3O medium borderline
Svir09G0021160.1 Alkaloid T3O high pass
Svir09G0021200.1 Alkaloid T3O medium borderline
Svir09G0021350.1 Alkaloid T3O medium borderline
Svir09G0023680.1 Alkaloid T3O low borderline