PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
Svir09G0023680.2 Alkaloid T3O low borderline
Svir09G0023680.3 Alkaloid T3O low borderline
Svir09G0026650.1 Alkaloid T3O medium borderline
Svir09G0026660.1 Alkaloid T3O medium borderline
Svir09G0026830.1 Alkaloid T3O medium borderline
Svir09G0027010.1 Alkaloid T3O medium borderline
Svir09G0028290.1 Alkaloid T3O medium borderline
Svir09G0030090.1 Alkaloid T3O medium borderline
Svir09G0039480.1 Alkaloid T3O medium borderline
Svir09G0040100.1 Alkaloid T3O medium borderline
Svir09G0040110.1 Alkaloid T3O medium borderline
Svir09G0040340.1 Alkaloid T3O medium borderline
Svir09G0040790.1 Alkaloid T3O low borderline
Svir09G0040790.2 Alkaloid T3O low borderline
Svir09G0040790.3 Alkaloid T3O low borderline
Svir09G0040790.4 Alkaloid T3O low borderline
Svir09G0040790.5 Alkaloid T3O low borderline
Svir09G0043750.1 Alkaloid T3O medium borderline
Svir09G0043760.1 Alkaloid T3O medium borderline
Svir09G0043770.1 Alkaloid T3O medium borderline
Svir09G0045880.1 Alkaloid T3O medium pass
Svir09G0045880.2 Alkaloid T3O medium pass
Svir09G0045880.3 Alkaloid T3O medium pass
Svir09G0045880.4 Alkaloid T3O medium pass
Svir09G0045880.5 Alkaloid T3O medium pass
Svir09G0045880.6 Alkaloid T3O medium pass
Svir09G0051760.1 Alkaloid T3O medium borderline
Svir09G0052880.2 Alkaloid T3O medium pass
Svir09G0057990.1 Alkaloid T3O low borderline
Svir09G0060090.1 Alkaloid T3O low borderline
Svir09G0060100.1 Alkaloid T3O low borderline
Svir01G0021060.1 Alkaloid TDC low borderline
Svir05G0036350.1 Alkaloid TDC medium borderline
Svir06G0007760.1 Alkaloid TDC medium borderline
Svir07G0001920.1 Alkaloid TDC low borderline
Svir08G0027260.1 Alkaloid TDC medium borderline
Svir08G0027300.1 Alkaloid TDC medium borderline
Svir08G0027320.1 Alkaloid TDC medium borderline
Svir08G0027470.1 Alkaloid TDC medium borderline
Svir09G0016670.1 Alkaloid TDC low borderline
Svir09G0016670.2 Alkaloid TDC low borderline
Svir01G0018760.1 Alkaloid TRI/TRII medium pass
Svir01G0028100.1 Alkaloid TRI/TRII low borderline
Svir01G0028120.1 Alkaloid TRI/TRII low borderline
Svir01G0039110.1 Alkaloid TRI/TRII medium pass
Svir02G0003160.1 Alkaloid TRI/TRII medium pass
Svir02G0026370.1 Alkaloid TRI/TRII medium borderline
Svir02G0026380.1 Alkaloid TRI/TRII medium borderline
Svir02G0026400.1 Alkaloid TRI/TRII low borderline
Svir02G0042070.1 Alkaloid TRI/TRII medium pass