PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

2604
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Svir07G0031390.1 Rosmarinic Acid C4H medium pass
Svir07G0034370.1 Rosmarinic Acid C4H low borderline
Svir07G0034410.1 Rosmarinic Acid C4H low borderline
Svir07G0034410.2 Rosmarinic Acid C4H low borderline
Svir07G0035840.1 Rosmarinic Acid C4H low borderline
Svir08G0000360.1 Rosmarinic Acid C4H low borderline
Svir08G0001390.1 Rosmarinic Acid C4H low borderline
Svir08G0003010.1 Rosmarinic Acid C4H low borderline
Svir08G0007790.1 Rosmarinic Acid C4H medium pass
Svir08G0007820.1 Rosmarinic Acid C4H low borderline
Svir08G0007840.1 Rosmarinic Acid C4H medium pass
Svir08G0014060.1 Rosmarinic Acid C4H low borderline
Svir08G0014260.1 Rosmarinic Acid C4H low borderline
Svir08G0014580.1 Rosmarinic Acid C4H medium pass
Svir08G0015410.1 Rosmarinic Acid C4H low borderline
Svir08G0015410.2 Rosmarinic Acid C4H low borderline
Svir08G0017570.1 Rosmarinic Acid C4H low borderline
Svir08G0017580.1 Rosmarinic Acid C4H low borderline
Svir08G0017610.1 Rosmarinic Acid C4H low borderline
Svir08G0017630.1 Rosmarinic Acid C4H low borderline
Svir08G0019120.1 Rosmarinic Acid C4H low borderline
Svir08G0019140.1 Rosmarinic Acid C4H low borderline
Svir08G0021510.1 Rosmarinic Acid C4H low borderline
Svir08G0023450.1 Rosmarinic Acid C4H medium pass
Svir08G0024070.1 Rosmarinic Acid C4H medium pass
Svir08G0026900.1 Rosmarinic Acid C4H medium pass
Svir08G0026910.1 Rosmarinic Acid C4H medium pass
Svir08G0027230.1 Rosmarinic Acid C4H medium pass
Svir08G0027270.1 Rosmarinic Acid C4H medium pass
Svir08G0027330.1 Rosmarinic Acid C4H medium pass
Svir08G0027350.1 Rosmarinic Acid C4H medium pass
Svir08G0027430.1 Rosmarinic Acid C4H medium pass
Svir08G0027460.1 Rosmarinic Acid C4H medium pass
Svir08G0027490.1 Rosmarinic Acid C4H medium pass
Svir08G0028730.1 Rosmarinic Acid C4H low borderline
Svir09G0000770.1 Rosmarinic Acid C4H low borderline
Svir09G0001140.1 Rosmarinic Acid C4H medium pass
Svir09G0001150.1 Rosmarinic Acid C4H medium pass
Svir09G0001160.1 Rosmarinic Acid C4H low borderline
Svir09G0001180.1 Rosmarinic Acid C4H low borderline
Svir09G0001200.1 Rosmarinic Acid C4H medium pass
Svir09G0001210.1 Rosmarinic Acid C4H medium pass
Svir09G0001240.1 Rosmarinic Acid C4H low borderline
Svir09G0001250.1 Rosmarinic Acid C4H low borderline
Svir09G0001260.1 Rosmarinic Acid C4H medium pass
Svir09G0001270.1 Rosmarinic Acid C4H medium pass
Svir09G0001290.1 Rosmarinic Acid C4H low borderline
Svir09G0009210.1 Rosmarinic Acid C4H low borderline
Svir09G0009220.1 Rosmarinic Acid C4H medium pass
Svir09G0009230.1 Rosmarinic Acid C4H medium pass