PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

2604
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Gene Pathway Family Confidence Status
Svir09G0009240.1 Rosmarinic Acid C4H medium pass
Svir09G0009250.1 Rosmarinic Acid C4H low borderline
Svir09G0009280.1 Rosmarinic Acid C4H medium pass
Svir09G0010730.1 Rosmarinic Acid C4H low borderline
Svir09G0014160.1 Rosmarinic Acid C4H low borderline
Svir09G0014260.1 Rosmarinic Acid C4H medium pass
Svir09G0019290.1 Rosmarinic Acid C4H medium pass
Svir09G0019310.1 Rosmarinic Acid C4H low borderline
Svir09G0020110.1 Rosmarinic Acid C4H low borderline
Svir09G0020240.1 Rosmarinic Acid C4H low borderline
Svir09G0020250.1 Rosmarinic Acid C4H low borderline
Svir09G0020830.1 Rosmarinic Acid C4H medium pass
Svir09G0020840.1 Rosmarinic Acid C4H medium pass
Svir09G0021160.1 Rosmarinic Acid C4H low borderline
Svir09G0021180.1 Rosmarinic Acid C4H medium pass
Svir09G0021200.1 Rosmarinic Acid C4H low borderline
Svir09G0021250.1 Rosmarinic Acid C4H low borderline
Svir09G0021270.1 Rosmarinic Acid C4H low borderline
Svir09G0021350.1 Rosmarinic Acid C4H medium pass
Svir09G0026650.1 Rosmarinic Acid C4H low borderline
Svir09G0026660.1 Rosmarinic Acid C4H low borderline
Svir09G0026830.1 Rosmarinic Acid C4H low borderline
Svir09G0027010.1 Rosmarinic Acid C4H medium pass
Svir09G0028290.1 Rosmarinic Acid C4H medium pass
Svir09G0030090.1 Rosmarinic Acid C4H medium pass
Svir09G0031380.1 Rosmarinic Acid C4H low borderline
Svir09G0032220.1 Rosmarinic Acid C4H low borderline
Svir09G0032460.1 Rosmarinic Acid C4H low borderline
Svir09G0032880.1 Rosmarinic Acid C4H medium pass
Svir09G0038790.1 Rosmarinic Acid C4H low borderline
Svir09G0038790.2 Rosmarinic Acid C4H low borderline
Svir09G0038790.3 Rosmarinic Acid C4H low borderline
Svir09G0039480.1 Rosmarinic Acid C4H medium pass
Svir09G0040100.1 Rosmarinic Acid C4H low borderline
Svir09G0040110.1 Rosmarinic Acid C4H low borderline
Svir09G0040340.1 Rosmarinic Acid C4H medium pass
Svir09G0040790.1 Rosmarinic Acid C4H low borderline
Svir09G0040790.2 Rosmarinic Acid C4H low borderline
Svir09G0040790.3 Rosmarinic Acid C4H low borderline
Svir09G0040790.4 Rosmarinic Acid C4H low borderline
Svir09G0040790.5 Rosmarinic Acid C4H low borderline
Svir09G0043110.1 Rosmarinic Acid C4H low borderline
Svir09G0043120.1 Rosmarinic Acid C4H low borderline
Svir09G0043130.1 Rosmarinic Acid C4H low borderline
Svir09G0043270.1 Rosmarinic Acid C4H low borderline
Svir09G0043360.1 Rosmarinic Acid C4H low borderline
Svir09G0043670.1 Rosmarinic Acid C4H low borderline
Svir09G0043750.1 Rosmarinic Acid C4H medium pass
Svir09G0043760.1 Rosmarinic Acid C4H medium pass
Svir09G0043770.1 Rosmarinic Acid C4H medium pass