PlantSME Plant secondary metabolism enzyme database

Setaria viridis (setaria_viridis)

Imported from atlas release summary for Setaria viridis.

3029
Candidate Protein Records
2604
Pathway-Level Records
6228
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Monocots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 700 19 BAHD (255) View species results
Alkaloid pathway 608 20 7DLGT (134) View species results
Phenylpropanoid pathway 539 11 POD (244) View species results
Flavonoid pathway 357 11 UFGT (234) View species results
Rosmarinic acid pathway 231 7 C4H (111) View species results
Steroid pathway 169 11 CAS (73) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2305 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 429 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Svir09G0045030.1 Rosmarinic Acid C4H low borderline
Svir09G0045080.1 Rosmarinic Acid C4H low borderline
Svir09G0045110.1 Rosmarinic Acid C4H medium pass
Svir09G0045880.1 Rosmarinic Acid C4H low borderline
Svir09G0045880.2 Rosmarinic Acid C4H low borderline
Svir09G0045880.3 Rosmarinic Acid C4H low borderline
Svir09G0045880.4 Rosmarinic Acid C4H low borderline
Svir09G0045880.5 Rosmarinic Acid C4H low borderline
Svir09G0045880.6 Rosmarinic Acid C4H low borderline
Svir09G0051760.1 Rosmarinic Acid C4H low borderline
Svir09G0052880.2 Rosmarinic Acid C4H low borderline
Svir09G0053600.1 Rosmarinic Acid C4H low borderline
Svir09G0057990.1 Rosmarinic Acid C4H low borderline
Svir09G0060560.1 Rosmarinic Acid C4H medium pass
Svir02G0034530.1 Rosmarinic Acid CPR medium pass
Svir03G0003890.1 Rosmarinic Acid CPR medium pass
Svir03G0030710.1 Rosmarinic Acid CPR medium pass
Svir03G0034480.1 Rosmarinic Acid CPR low borderline
Svir05G0033540.1 Rosmarinic Acid CPR medium pass
Svir05G0033540.2 Rosmarinic Acid CPR medium pass
Svir05G0033540.3 Rosmarinic Acid CPR medium pass
Svir05G0033540.4 Rosmarinic Acid CPR medium pass
Svir06G0008850.1 Rosmarinic Acid CPR low borderline
Svir06G0010430.1 Rosmarinic Acid CPR medium pass
Svir06G0026500.1 Rosmarinic Acid CPR low borderline
Svir06G0026500.2 Rosmarinic Acid CPR low borderline
Svir08G0001530.1 Rosmarinic Acid CPR medium pass
Svir05G0001010.1 Rosmarinic Acid HPPR medium pass
Svir05G0001020.1 Rosmarinic Acid HPPR medium pass
Svir07G0000530.1 Rosmarinic Acid HPPR medium pass
Svir07G0000530.2 Rosmarinic Acid HPPR medium pass
Svir07G0000530.3 Rosmarinic Acid HPPR medium pass
Svir07G0000530.4 Rosmarinic Acid HPPR medium pass
Svir07G0000530.5 Rosmarinic Acid HPPR medium pass
Svir07G0000530.6 Rosmarinic Acid HPPR medium pass
Svir07G0000810.1 Rosmarinic Acid HPPR medium pass
Svir07G0000830.1 Rosmarinic Acid HPPR medium pass
Svir07G0000860.1 Rosmarinic Acid HPPR medium pass
Svir07G0000870.1 Rosmarinic Acid HPPR medium pass
Svir09G0027460.1 Rosmarinic Acid HPPR medium pass
Svir01G0027080.1 Rosmarinic Acid PAL high pass
Svir01G0027090.1 Rosmarinic Acid PAL high pass
Svir01G0027100.1 Rosmarinic Acid PAL high pass
Svir01G0027110.1 Rosmarinic Acid PAL high pass
Svir01G0027120.1 Rosmarinic Acid PAL high pass
Svir02G0048700.1 Rosmarinic Acid PAL high pass
Svir06G0020910.1 Rosmarinic Acid PAL high pass
Svir07G0018980.1 Rosmarinic Acid PAL high pass
Svir07G0018980.2 Rosmarinic Acid PAL high pass
Svir07G0019010.1 Rosmarinic Acid PAL high pass