PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1347
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status
Sole04G0014020 Rosmarinic Acid 4CL medium pass
Sole04G0014830 Rosmarinic Acid 4CL medium pass
Sole04G0021910 Rosmarinic Acid 4CL low borderline
Sole04G0031750 Rosmarinic Acid 4CL medium pass
Sole05G0000560 Rosmarinic Acid 4CL low borderline
Sole05G0000580 Rosmarinic Acid 4CL low borderline
Sole05G0012050 Rosmarinic Acid 4CL medium pass
Sole05G0012060 Rosmarinic Acid 4CL medium pass
Sole05G0020320 Rosmarinic Acid 4CL medium pass
Sole05G0020370 Rosmarinic Acid 4CL medium pass
Sole05G0020420 Rosmarinic Acid 4CL medium pass
Sole05G0020900 Rosmarinic Acid 4CL medium pass
Sole05G0020910 Rosmarinic Acid 4CL medium pass
Sole06G0014870 Rosmarinic Acid 4CL low borderline
Sole06G0020040 Rosmarinic Acid 4CL medium pass
SoleSpoScf_005100011200 Rosmarinic Acid 4CL medium pass
SoleSpoScf_008620021390 Rosmarinic Acid 4CL medium pass
SoleSpoScf_013290036920 Rosmarinic Acid 4CL low borderline
SoleSpoScf_016780046190 Rosmarinic Acid 4CL low borderline
SoleSpoScf_018040049310 Rosmarinic Acid 4CL medium pass
SoleSpoScf_031390069740 Rosmarinic Acid 4CL low borderline
SoleSuper_scaffold_1220085510 Rosmarinic Acid 4CL medium pass
SoleSuper_scaffold_1220085520 Rosmarinic Acid 4CL medium pass
SoleSuper_scaffold_1220085530 Rosmarinic Acid 4CL medium pass
SoleSuper_scaffold_1330087000 Rosmarinic Acid 4CL low borderline
SoleSuper_scaffold_1600088680 Rosmarinic Acid 4CL medium pass
SoleSuper_scaffold_1600088710 Rosmarinic Acid 4CL medium pass
SoleSuper_scaffold_2170091970 Rosmarinic Acid 4CL medium pass
SoleSuper_scaffold_510093910 Rosmarinic Acid 4CL medium pass
SoleSuper_scaffold_510093930 Rosmarinic Acid 4CL medium pass
SoleSuper_scaffold_930097330 Rosmarinic Acid 4CL low borderline
SoleSuper_scaffold_930097340 Rosmarinic Acid 4CL medium pass