PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1347
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
Reset
Gene Pathway Family Confidence Status Best Target
Sole01G0007790 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Sole01G0008450 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Sole01G0008470 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Sole01G0008570 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
Sole01G0013150 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Sole02G0021560 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
Sole03G0000800 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
Sole03G0013130 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Sole03G0013140 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
Sole04G0004220 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Sole04G0004240 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
Sole05G0010620 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
SoleSpoScf_000920001540 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
SoleSpoScf_000920001550 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
SoleSpoScf_006050013560 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
SoleSpoScf_009290023730 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
SoleSpoScf_009900025770 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
SoleSpoScf_009990026270 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
SoleSpoScf_013100036150 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
SoleSpoScf_013100036190 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
SoleSpoScf_017590048350 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
SoleSpoScf_040870074640 Phenylpropanoid LAC medium pass LAC__00004__sp_Q9LFD2_LAC8_ARATH
SoleSpoScf_278000082020 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
SoleSuper_scaffold_2300092750 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH