PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1347
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: RAS
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Gene Pathway Family Confidence Status
Sole01G0017800 Rosmarinic Acid RAS medium pass
Sole01G0017930 Rosmarinic Acid RAS medium pass
Sole02G0001390 Rosmarinic Acid RAS medium pass
Sole02G0004910 Rosmarinic Acid RAS low borderline
Sole02G0009640 Rosmarinic Acid RAS low borderline
Sole02G0009650 Rosmarinic Acid RAS low borderline
Sole02G0009660 Rosmarinic Acid RAS low borderline
Sole02G0016960 Rosmarinic Acid RAS medium pass
Sole03G0026610 Rosmarinic Acid RAS medium pass
Sole04G0004500 Rosmarinic Acid RAS low borderline
Sole04G0012950 Rosmarinic Acid RAS medium pass
Sole04G0012960 Rosmarinic Acid RAS medium pass
Sole04G0012970 Rosmarinic Acid RAS medium pass
Sole04G0014590 Rosmarinic Acid RAS low borderline
Sole04G0028050 Rosmarinic Acid RAS low borderline
Sole05G0006310 Rosmarinic Acid RAS low borderline
Sole05G0011190 Rosmarinic Acid RAS medium pass
Sole05G0011200 Rosmarinic Acid RAS medium pass
Sole05G0011210 Rosmarinic Acid RAS medium pass
Sole05G0011220 Rosmarinic Acid RAS medium pass
Sole05G0015020 Rosmarinic Acid RAS medium pass
Sole05G0015060 Rosmarinic Acid RAS low borderline
Sole05G0020700 Rosmarinic Acid RAS medium pass
Sole06G0010330 Rosmarinic Acid RAS medium pass
SoleSpoScf_004500009950 Rosmarinic Acid RAS medium pass
SoleSpoScf_011270030140 Rosmarinic Acid RAS medium pass
SoleSpoScf_011820032390 Rosmarinic Acid RAS medium pass
SoleSpoScf_013250036860 Rosmarinic Acid RAS low borderline
SoleSpoScf_017850048900 Rosmarinic Acid RAS medium pass
SoleSpoScf_017850048910 Rosmarinic Acid RAS medium pass
SoleSpoScf_019340051960 Rosmarinic Acid RAS medium pass
SoleSpoScf_019650052570 Rosmarinic Acid RAS medium pass
SoleSpoScf_032290070430 Rosmarinic Acid RAS low borderline
SoleSuper_scaffold_1020083840 Rosmarinic Acid RAS low borderline