PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1347
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SLS
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Gene Pathway Family Confidence Status Best Target
Sole02G0001880 Alkaloid SLS low borderline SLS__00001__sp_Q05047_SLS1_CATRO
Sole02G0012090 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Sole02G0012100 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Sole02G0012120 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Sole02G0012130 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Sole02G0019440 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Sole02G0019450 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Sole02G0022510 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Sole03G0017280 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Sole04G0023680 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
Sole05G0005950 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Sole05G0005990 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Sole05G0006000 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Sole06G0008120 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Sole06G0012840 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Sole06G0012850 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Sole06G0012910 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
Sole06G0013660 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
SoleSpoScf_011720032120 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
SoleSpoScf_013690037800 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
SoleSpoScf_017220047190 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
SoleSpoScf_017220047200 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
SoleSpoScf_017220047210 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
SoleSpoScf_017220047220 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
SoleSpoScf_017220047250 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
SoleSpoScf_023290059650 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
SoleSpoScf_028550067330 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO
SoleSpoScf_030180068850 Alkaloid SLS medium borderline SLS__00001__sp_Q05047_SLS1_CATRO
SoleSpoScf_123620080290 Alkaloid SLS medium borderline SLS__00002__sp_U5NDT8_SLS2_CATRO