PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1347
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: TRI/TRII
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Gene Pathway Family Confidence Status
Sole01G0004570 Alkaloid TRI/TRII medium pass
Sole01G0009320 Alkaloid TRI/TRII medium pass
Sole01G0012740 Alkaloid TRI/TRII medium pass
Sole01G0026560 Alkaloid TRI/TRII medium pass
Sole02G0006290 Alkaloid TRI/TRII medium pass
Sole02G0006300 Alkaloid TRI/TRII medium pass
Sole02G0006640 Alkaloid TRI/TRII medium pass
Sole02G0006650 Alkaloid TRI/TRII medium pass
Sole03G0003530 Alkaloid TRI/TRII low borderline
Sole03G0003750 Alkaloid TRI/TRII medium pass
Sole03G0003760 Alkaloid TRI/TRII medium pass
Sole03G0010920 Alkaloid TRI/TRII low borderline
Sole03G0013840 Alkaloid TRI/TRII low borderline
Sole03G0013860 Alkaloid TRI/TRII low borderline
Sole03G0013870 Alkaloid TRI/TRII low borderline
Sole03G0028390 Alkaloid TRI/TRII low borderline
Sole04G0005630 Alkaloid TRI/TRII low borderline
Sole04G0013930 Alkaloid TRI/TRII low borderline
Sole04G0016030 Alkaloid TRI/TRII medium pass
Sole04G0021600 Alkaloid TRI/TRII low borderline
Sole04G0022240 Alkaloid TRI/TRII medium borderline
Sole05G0000320 Alkaloid TRI/TRII medium pass
Sole05G0012140 Alkaloid TRI/TRII medium pass
Sole05G0012920 Alkaloid TRI/TRII low borderline
Sole05G0017470 Alkaloid TRI/TRII medium pass
Sole06G0001760 Alkaloid TRI/TRII medium pass
Sole06G0001770 Alkaloid TRI/TRII medium pass
Sole06G0002460 Alkaloid TRI/TRII medium pass
Sole06G0002470 Alkaloid TRI/TRII low borderline
Sole06G0002480 Alkaloid TRI/TRII low borderline
Sole06G0002500 Alkaloid TRI/TRII medium pass
Sole06G0009590 Alkaloid TRI/TRII low borderline
Sole06G0012760 Alkaloid TRI/TRII low borderline
Sole06G0018020 Alkaloid TRI/TRII low borderline
SoleSpoScf_010380027550 Alkaloid TRI/TRII medium pass
SoleSpoScf_011320030470 Alkaloid TRI/TRII medium pass
SoleSpoScf_013400037090 Alkaloid TRI/TRII medium pass
SoleSpoScf_015660043490 Alkaloid TRI/TRII medium pass
SoleSpoScf_025970063870 Alkaloid TRI/TRII medium pass
SoleSpoScf_031920070130 Alkaloid TRI/TRII low borderline
SoleSpoScf_031920070140 Alkaloid TRI/TRII low borderline
SoleSpoScf_039750074260 Alkaloid TRI/TRII medium pass
SoleSpoScf_064840078560 Alkaloid TRI/TRII medium pass
SoleSuper_scaffold_2060091130 Alkaloid TRI/TRII low borderline