PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1347
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CSE
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Gene Pathway Family Confidence Status Best Target
Sole01G0020630 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Sole01G0027120 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Sole03G0015820 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Sole03G0015830 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Sole03G0024220 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Sole04G0006190 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
Sole04G0010090 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Sole04G0011090 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Sole04G0016070 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Sole04G0027010 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Sole04G0027100 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
Sole05G0003040 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
SoleSpoScf_009350023840 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SoleSpoScf_012330034030 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SoleSpoScf_013520037460 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SoleSpoScf_014930041720 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
SoleSpoScf_022530058100 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SoleSpoScf_022880058710 Phenylpropanoid CSE low borderline CSE__00001__sp_P0DO76_4HBS_VANPL
SoleSpoScf_027870066480 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SoleSpoScf_034110071300 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SoleSpoScf_046980076360 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SoleSuper_scaffold_1220085260 Phenylpropanoid CSE medium pass CSE__00002__sp_Q9C942_CSE_ARATH
SoleSuper_scaffold_2130091610 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SoleSuper_scaffold_450093740 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL
SoleSuper_scaffold_500093870 Phenylpropanoid CSE medium pass CSE__00001__sp_P0DO76_4HBS_VANPL