PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1657
Candidate Protein Records
1347
Pathway-Level Records
3352
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Sole01G0027770 Alkaloid MPO high pass
Sole03G0013340 Alkaloid MPO medium pass
Sole03G0013350 Alkaloid MPO medium pass
Sole03G0017470 Alkaloid MPO medium pass
Sole05G0005620 Alkaloid MPO medium pass
Sole05G0013220 Alkaloid MPO low borderline
Sole06G0020600 Alkaloid MPO medium pass
Sole06G0020690 Alkaloid MPO low borderline
SoleSpoScf_181810081100 Alkaloid MPO low borderline
SoleSuper_scaffold_1750089230 Alkaloid MPO low borderline
Sole02G0004540 Alkaloid NCS medium borderline
Sole02G0006010 Alkaloid NCS medium borderline
Sole03G0008980 Alkaloid NCS medium borderline
Sole03G0010190 Alkaloid NCS medium borderline
Sole03G0026280 Alkaloid NCS medium borderline
Sole04G0028620 Alkaloid NCS low borderline
Sole06G0009620 Alkaloid NCS medium borderline
Sole06G0016950 Alkaloid NCS medium borderline
Sole06G0016960 Alkaloid NCS medium borderline
SoleSpoScf_011150029680 Alkaloid NCS medium borderline
SoleSpoScf_013440037210 Alkaloid NCS medium borderline
Sole01G0005600 Alkaloid NMT low borderline
Sole01G0012170 Alkaloid NMT medium pass
Sole01G0024990 Alkaloid NMT medium pass
Sole02G0000590 Alkaloid NMT low borderline
Sole02G0003020 Alkaloid NMT medium pass
Sole02G0008800 Alkaloid NMT medium pass
Sole02G0008810 Alkaloid NMT low borderline
Sole02G0010320 Alkaloid NMT low borderline
Sole02G0016780 Alkaloid NMT medium borderline
Sole02G0018660 Alkaloid NMT medium pass
Sole02G0020020 Alkaloid NMT medium pass
Sole02G0020390 Alkaloid NMT medium borderline
Sole02G0021840 Alkaloid NMT low borderline
Sole02G0022310 Alkaloid NMT medium pass
Sole03G0003770 Alkaloid NMT medium pass
Sole03G0005210 Alkaloid NMT medium pass
Sole03G0005920 Alkaloid NMT medium pass
Sole03G0007000 Alkaloid NMT medium pass
Sole03G0008850 Alkaloid NMT medium borderline
Sole03G0018970 Alkaloid NMT medium pass
Sole03G0019130 Alkaloid NMT medium pass
Sole03G0020290 Alkaloid NMT medium pass
Sole03G0021240 Alkaloid NMT medium pass
Sole03G0027940 Alkaloid NMT low borderline
Sole04G0002080 Alkaloid NMT low borderline
Sole04G0019740 Alkaloid NMT medium pass
Sole04G0021370 Alkaloid NMT medium borderline
Sole04G0022890 Alkaloid NMT low borderline
Sole04G0029600 Alkaloid NMT low borderline