PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1657
Candidate Protein Records
1347
Pathway-Level Records
3352
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
SoleSuper_scaffold_890096920 Alkaloid NMT medium pass
SoleSuper_scaffold_960097440 Alkaloid NMT medium pass
Sole01G0013340 Alkaloid PMT medium pass
Sole01G0013960 Alkaloid PMT medium borderline
Sole01G0017800 Alkaloid PMT low borderline
Sole01G0017930 Alkaloid PMT low borderline
Sole01G0018510 Alkaloid PMT medium borderline
Sole02G0009640 Alkaloid PMT low borderline
Sole02G0009650 Alkaloid PMT medium pass
Sole02G0009660 Alkaloid PMT medium pass
Sole03G0004870 Alkaloid PMT medium borderline
Sole03G0026610 Alkaloid PMT low borderline
Sole04G0028050 Alkaloid PMT low borderline
Sole05G0011190 Alkaloid PMT low borderline
Sole05G0011200 Alkaloid PMT low borderline
Sole05G0011210 Alkaloid PMT low borderline
Sole05G0011220 Alkaloid PMT low borderline
Sole05G0015020 Alkaloid PMT medium pass
Sole05G0015060 Alkaloid PMT medium pass
Sole06G0000790 Alkaloid PMT low borderline
SoleSpoScf_004500009950 Alkaloid PMT low borderline
SoleSpoScf_008530021030 Alkaloid PMT low borderline
SoleSpoScf_011270030140 Alkaloid PMT medium pass
SoleSpoScf_011820032390 Alkaloid PMT low borderline
SoleSpoScf_019180051520 Alkaloid PMT medium pass
SoleSpoScf_019650052570 Alkaloid PMT low borderline
SoleSpoScf_061170078350 Alkaloid PMT low borderline
Sole01G0004210 Alkaloid PYKS low borderline
Sole01G0004250 Alkaloid PYKS high pass
Sole01G0010690 Alkaloid PYKS low borderline
Sole01G0016830 Alkaloid PYKS high pass
Sole01G0016900 Alkaloid PYKS high pass
Sole01G0026900 Alkaloid PYKS low borderline
Sole04G0006290 Alkaloid PYKS low borderline
Sole04G0025260 Alkaloid PYKS high pass
Sole05G0000660 Alkaloid PYKS low borderline
Sole05G0014450 Alkaloid PYKS low borderline
Sole05G0019860 Alkaloid PYKS high pass
Sole06G0001790 Alkaloid PYKS low borderline
Sole06G0001800 Alkaloid PYKS low borderline
Sole06G0002100 Alkaloid PYKS high pass
Sole06G0010270 Alkaloid PYKS low borderline
Sole06G0021020 Alkaloid PYKS low borderline
SoleSpoScf_010050026610 Alkaloid PYKS low borderline
SoleSpoScf_011030029330 Alkaloid PYKS high pass
SoleSpoScf_012360034190 Alkaloid PYKS high pass
SoleSpoScf_012360034230 Alkaloid PYKS high pass
SoleSpoScf_014210039640 Alkaloid PYKS low borderline
SoleSpoScf_015330042660 Alkaloid PYKS low borderline
SoleSpoScf_015670043660 Alkaloid PYKS high pass