PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1657
Candidate Protein Records
1347
Pathway-Level Records
3352
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
Sole02G0003190 Alkaloid T3O medium borderline
Sole02G0009620 Alkaloid T3O medium pass
Sole02G0012170 Alkaloid T3O medium borderline
Sole02G0012180 Alkaloid T3O medium borderline
Sole02G0012190 Alkaloid T3O medium borderline
Sole02G0013500 Alkaloid T3O low borderline
Sole02G0015330 Alkaloid T3O medium borderline
Sole02G0015360 Alkaloid T3O medium borderline
Sole02G0015390 Alkaloid T3O medium borderline
Sole02G0016210 Alkaloid T3O medium borderline
Sole02G0019840 Alkaloid T3O low borderline
Sole02G0021320 Alkaloid T3O medium pass
Sole02G0021330 Alkaloid T3O medium pass
Sole02G0022050 Alkaloid T3O low borderline
Sole02G0022090 Alkaloid T3O medium pass
Sole02G0022500 Alkaloid T3O medium pass
Sole02G0022560 Alkaloid T3O medium pass
Sole02G0022740 Alkaloid T3O medium pass
Sole03G0006900 Alkaloid T3O medium borderline
Sole03G0012470 Alkaloid T3O medium borderline
Sole03G0015580 Alkaloid T3O medium borderline
Sole03G0019560 Alkaloid T3O medium pass
Sole03G0026580 Alkaloid T3O medium borderline
Sole03G0026590 Alkaloid T3O medium borderline
Sole04G0004950 Alkaloid T3O medium pass
Sole04G0011830 Alkaloid T3O medium borderline
Sole04G0011990 Alkaloid T3O medium pass
Sole04G0016010 Alkaloid T3O low borderline
Sole04G0024550 Alkaloid T3O medium borderline
Sole04G0027700 Alkaloid T3O medium borderline
Sole04G0027850 Alkaloid T3O medium borderline
Sole05G0009480 Alkaloid T3O medium borderline
Sole05G0011130 Alkaloid T3O medium borderline
Sole05G0011640 Alkaloid T3O medium borderline
Sole06G0004230 Alkaloid T3O medium borderline
Sole06G0008420 Alkaloid T3O medium pass
Sole06G0009740 Alkaloid T3O medium borderline
Sole06G0009750 Alkaloid T3O medium borderline
Sole06G0010590 Alkaloid T3O medium pass
Sole06G0014000 Alkaloid T3O low borderline
Sole06G0015990 Alkaloid T3O medium borderline
Sole06G0017040 Alkaloid T3O medium pass
Sole06G0020620 Alkaloid T3O medium borderline
Sole06G0020630 Alkaloid T3O medium borderline
Sole06G0020640 Alkaloid T3O medium borderline
SoleSpoScf_001460003130 Alkaloid T3O medium borderline
SoleSpoScf_002770005630 Alkaloid T3O medium borderline
SoleSpoScf_004340009090 Alkaloid T3O medium borderline
SoleSpoScf_005440012250 Alkaloid T3O medium borderline
SoleSpoScf_005440012260 Alkaloid T3O medium borderline