PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1657
Candidate Protein Records
1347
Pathway-Level Records
3352
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
SoleSpoScf_006040013540 Alkaloid T3O medium borderline
SoleSpoScf_006610015910 Alkaloid T3O medium borderline
SoleSpoScf_006610015920 Alkaloid T3O medium borderline
SoleSpoScf_007090017680 Alkaloid T3O medium pass
SoleSpoScf_007280018250 Alkaloid T3O medium borderline
SoleSpoScf_008140020270 Alkaloid T3O medium borderline
SoleSpoScf_008500020930 Alkaloid T3O medium borderline
SoleSpoScf_009400024060 Alkaloid T3O low borderline
SoleSpoScf_009480024340 Alkaloid T3O medium borderline
SoleSpoScf_009900025730 Alkaloid T3O medium pass
SoleSpoScf_010230027140 Alkaloid T3O low borderline
SoleSpoScf_010230027150 Alkaloid T3O medium pass
SoleSpoScf_010640028590 Alkaloid T3O medium pass
SoleSpoScf_011160029750 Alkaloid T3O medium pass
SoleSpoScf_012480034460 Alkaloid T3O medium borderline
SoleSpoScf_012800035530 Alkaloid T3O medium borderline
SoleSpoScf_012800035540 Alkaloid T3O medium borderline
SoleSpoScf_012800035550 Alkaloid T3O medium borderline
SoleSpoScf_013090036050 Alkaloid T3O medium pass
SoleSpoScf_013090036060 Alkaloid T3O medium pass
SoleSpoScf_013320036970 Alkaloid T3O medium pass
SoleSpoScf_015010041990 Alkaloid T3O medium borderline
SoleSpoScf_016350045410 Alkaloid T3O medium borderline
SoleSpoScf_016350045420 Alkaloid T3O medium borderline
SoleSpoScf_016400045580 Alkaloid T3O medium borderline
SoleSpoScf_018080049430 Alkaloid T3O medium borderline
SoleSpoScf_019220051600 Alkaloid T3O medium pass
SoleSpoScf_024370061380 Alkaloid T3O low borderline
SoleSpoScf_027830066420 Alkaloid T3O medium pass
SoleSpoScf_029300068060 Alkaloid T3O medium borderline
SoleSpoScf_031290069560 Alkaloid T3O low borderline
SoleSpoScf_031550069810 Alkaloid T3O low borderline
SoleSpoScf_032520070620 Alkaloid T3O medium borderline
SoleSpoScf_033360071010 Alkaloid T3O medium borderline
SoleSpoScf_035490072120 Alkaloid T3O medium borderline
SoleSpoScf_037930073510 Alkaloid T3O medium borderline
SoleSpoScf_039440074110 Alkaloid T3O medium borderline
SoleSpoScf_049040076930 Alkaloid T3O medium borderline
SoleSuper_scaffold_1380087250 Alkaloid T3O medium borderline
SoleSuper_scaffold_1600088540 Alkaloid T3O medium pass
SoleSuper_scaffold_650095140 Alkaloid T3O medium borderline
SoleSuper_scaffold_930097210 Alkaloid T3O medium borderline
Sole01G0025570 Alkaloid TDC low borderline
Sole02G0016490 Alkaloid TDC low borderline
Sole02G0016510 Alkaloid TDC low borderline
Sole03G0003170 Alkaloid TDC low borderline
Sole03G0020550 Alkaloid TDC low borderline
Sole04G0018520 Alkaloid TDC low borderline
Sole06G0017230 Alkaloid TDC low borderline
SoleSpoScf_019470052230 Alkaloid TDC medium borderline