PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1347
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
Sole04G0002680 Flavonoid ANR medium borderline
Sole04G0002690 Flavonoid ANR medium borderline
Sole04G0002700 Flavonoid ANR medium borderline
Sole04G0002710 Flavonoid ANR medium borderline
Sole04G0002720 Flavonoid ANR medium borderline
Sole04G0002730 Flavonoid ANR medium borderline
Sole04G0012220 Flavonoid ANR low borderline
Sole05G0019760 Flavonoid ANR low borderline
Sole06G0016860 Flavonoid ANR medium borderline
SoleSpoScf_000920001430 Flavonoid ANR medium pass
SoleSpoScf_004090008340 Flavonoid ANR medium borderline
SoleSpoScf_026680064830 Flavonoid ANR medium borderline
SoleSpoScf_026680064840 Flavonoid ANR medium borderline
SoleSpoScf_053670077620 Flavonoid ANR medium borderline
SoleSpoScf_054510077680 Flavonoid ANR medium pass
SoleSpoScf_102430079860 Flavonoid ANR medium borderline
SoleSpoScf_255240081790 Flavonoid ANR medium pass
SoleSuper_scaffold_1140084660 Flavonoid ANR medium borderline
Sole02G0005970 Flavonoid ANS/LDOX medium borderline
Sole02G0006010 Flavonoid ANS/LDOX medium pass
Sole02G0012310 Flavonoid ANS/LDOX low borderline
Sole02G0013270 Flavonoid ANS/LDOX medium borderline
Sole03G0007340 Flavonoid ANS/LDOX medium pass
Sole03G0008950 Flavonoid ANS/LDOX medium borderline
Sole03G0010220 Flavonoid ANS/LDOX low borderline
Sole05G0007140 Flavonoid ANS/LDOX medium borderline
Sole06G0009620 Flavonoid ANS/LDOX medium pass
SoleSpoScf_001490003490 Flavonoid ANS/LDOX medium borderline
SoleSpoScf_009040022920 Flavonoid ANS/LDOX medium borderline
Sole01G0013920 Flavonoid C4H medium borderline
Sole03G0017130 Flavonoid C4H low borderline
Sole06G0014570 Flavonoid C4H low borderline
SoleSpoScf_013090036060 Flavonoid C4H medium borderline
SoleSpoScf_025770063600 Flavonoid C4H low borderline
SoleSuper_scaffold_1240085860 Flavonoid C4H low borderline
SoleSuper_scaffold_880096830 Flavonoid C4H medium borderline
Sole04G0000180 Flavonoid CHI medium pass
Sole04G0015450 Flavonoid CHI medium pass
SoleSpoScf_015130042270 Flavonoid CHI medium pass
Sole01G0004250 Flavonoid CHS medium pass
Sole01G0016830 Flavonoid CHS medium pass
Sole01G0016900 Flavonoid CHS medium pass
Sole04G0025260 Flavonoid CHS medium pass
Sole05G0019860 Flavonoid CHS medium pass
Sole06G0002100 Flavonoid CHS medium pass
SoleSpoScf_011030029330 Flavonoid CHS medium pass
SoleSpoScf_012360034190 Flavonoid CHS medium pass
SoleSpoScf_012360034230 Flavonoid CHS medium pass
SoleSpoScf_015670043660 Flavonoid CHS medium pass
SoleSpoScf_015720043830 Flavonoid CHS medium pass