PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1347
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
SoleSpoScf_006830016890 Steroid BR6OX2/CYP85A2 low borderline
SoleSpoScf_007280018250 Steroid BR6OX2/CYP85A2 low borderline
SoleSpoScf_016790046290 Steroid BR6OX2/CYP85A2 low borderline
SoleSpoScf_017220047190 Steroid BR6OX2/CYP85A2 low borderline
SoleSpoScf_017220047210 Steroid BR6OX2/CYP85A2 low borderline
SoleSpoScf_017220047220 Steroid BR6OX2/CYP85A2 low borderline
SoleSpoScf_017220047250 Steroid BR6OX2/CYP85A2 low borderline
SoleSpoScf_021540056120 Steroid BR6OX2/CYP85A2 low borderline
SoleSpoScf_021540056140 Steroid BR6OX2/CYP85A2 low borderline
SoleSpoScf_027830066420 Steroid BR6OX2/CYP85A2 low borderline
SoleSpoScf_033360071010 Steroid BR6OX2/CYP85A2 low borderline
SoleSpoScf_035490072120 Steroid BR6OX2/CYP85A2 low borderline
SoleSuper_scaffold_880096830 Steroid BR6OX2/CYP85A2 low borderline
Sole01G0011580 Steroid CAS medium pass
Sole01G0011590 Steroid CAS low borderline
Sole01G0011620 Steroid CAS medium pass
Sole01G0011680 Steroid CAS medium pass
Sole01G0015400 Steroid CAS medium pass
Sole01G0015420 Steroid CAS medium pass
Sole02G0001890 Steroid CAS low borderline
Sole02G0013540 Steroid CAS medium pass
Sole03G0010930 Steroid CAS medium pass
Sole04G0009960 Steroid CAS low borderline
Sole04G0009970 Steroid CAS low borderline
Sole04G0021060 Steroid CAS low borderline
Sole04G0021190 Steroid CAS low borderline
Sole04G0024730 Steroid CAS medium pass
Sole04G0032300 Steroid CAS low borderline
Sole04G0033540 Steroid CAS low borderline
Sole05G0010040 Steroid CAS medium pass
Sole05G0017800 Steroid CAS medium pass
Sole06G0006060 Steroid CAS medium pass
Sole06G0006070 Steroid CAS medium pass
Sole06G0018710 Steroid CAS low borderline
Sole06G0020440 Steroid CAS medium pass
SoleSpoScf_000430000530 Steroid CAS medium pass
SoleSpoScf_006210013890 Steroid CAS medium pass
SoleSpoScf_016400045570 Steroid CAS medium pass
SoleSpoScf_022100057250 Steroid CAS low borderline
SoleSpoScf_032990070840 Steroid CAS medium pass
SoleSpoScf_037290073250 Steroid CAS medium pass
SoleSpoScf_043290075370 Steroid CAS medium pass
SoleSpoScf_043290075380 Steroid CAS medium pass
SoleSpoScf_056250077830 Steroid CAS medium pass
SoleSpoScf_194420081210 Steroid CAS low borderline
Sole01G0022020 Steroid CPD/CYP90A1 low borderline
Sole03G0019560 Steroid CPD/CYP90A1 low borderline
Sole03G0026580 Steroid CPD/CYP90A1 low borderline
Sole05G0002210 Steroid CPD/CYP90A1 low borderline
Sole05G0002220 Steroid CPD/CYP90A1 low borderline