PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1657
Candidate Protein Records
1347
Pathway-Level Records
3352
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Protein/Isoform Record Pathway Family Confidence Status
SoleSpoScf_039200073970 Flavonoid F3'H/CYP75B medium borderline
SoleSpoScf_049040076930 Flavonoid F3'H/CYP75B medium borderline
SoleSpoScf_059080078160 Flavonoid F3'H/CYP75B medium borderline
SoleSuper_scaffold_1240085870 Flavonoid F3'H/CYP75B medium borderline
SoleSuper_scaffold_1600088540 Flavonoid F3'H/CYP75B low borderline
Sole01G0004330 Flavonoid F3H medium borderline
Sole01G0008220 Flavonoid F3H medium borderline
Sole01G0017780 Flavonoid F3H medium borderline
Sole01G0020170 Flavonoid F3H low borderline
Sole01G0021120 Flavonoid F3H medium borderline
Sole01G0024710 Flavonoid F3H medium borderline
Sole01G0024720 Flavonoid F3H medium borderline
Sole02G0002800 Flavonoid F3H low borderline
Sole02G0004540 Flavonoid F3H low borderline
Sole02G0005860 Flavonoid F3H medium borderline
Sole02G0005870 Flavonoid F3H medium borderline
Sole02G0005900 Flavonoid F3H medium pass
Sole02G0005920 Flavonoid F3H medium borderline
Sole02G0005930 Flavonoid F3H medium borderline
Sole02G0005940 Flavonoid F3H medium borderline
Sole02G0005960 Flavonoid F3H medium borderline
Sole02G0005980 Flavonoid F3H medium borderline
Sole02G0005990 Flavonoid F3H medium borderline
Sole02G0006020 Flavonoid F3H medium borderline
Sole02G0006740 Flavonoid F3H medium borderline
Sole02G0007910 Flavonoid F3H medium borderline
Sole02G0009480 Flavonoid F3H medium borderline
Sole02G0012300 Flavonoid F3H medium borderline
Sole02G0012320 Flavonoid F3H medium borderline
Sole02G0012330 Flavonoid F3H medium borderline
Sole02G0012340 Flavonoid F3H medium borderline
Sole02G0012380 Flavonoid F3H medium borderline
Sole02G0018600 Flavonoid F3H medium borderline
Sole02G0018920 Flavonoid F3H medium pass
Sole02G0022530 Flavonoid F3H medium borderline
Sole03G0000390 Flavonoid F3H medium borderline
Sole03G0001720 Flavonoid F3H medium borderline
Sole03G0006980 Flavonoid F3H medium borderline
Sole03G0008900 Flavonoid F3H medium borderline
Sole03G0008910 Flavonoid F3H medium borderline
Sole03G0008920 Flavonoid F3H medium borderline
Sole03G0008930 Flavonoid F3H medium borderline
Sole03G0008940 Flavonoid F3H medium borderline
Sole03G0008960 Flavonoid F3H medium borderline
Sole03G0008980 Flavonoid F3H medium borderline
Sole03G0008990 Flavonoid F3H medium borderline
Sole03G0009000 Flavonoid F3H medium borderline
Sole03G0010170 Flavonoid F3H medium borderline
Sole03G0010180 Flavonoid F3H medium borderline
Sole03G0010190 Flavonoid F3H medium borderline