PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1347
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
SoleSpoScf_013690037800 Steroid CYP90D1 low borderline
SoleSpoScf_015010041990 Steroid CYP90D1 low borderline
SoleSpoScf_016350045410 Steroid CYP90D1 low borderline
SoleSpoScf_016350045420 Steroid CYP90D1 low borderline
SoleSpoScf_016400045580 Steroid CYP90D1 low borderline
SoleSpoScf_017220047230 Steroid CYP90D1 low borderline
SoleSpoScf_019220051600 Steroid CYP90D1 medium borderline
SoleSpoScf_028550067330 Steroid CYP90D1 low borderline
SoleSpoScf_037930073510 Steroid CYP90D1 low borderline
SoleSpoScf_123620080290 Steroid CYP90D1 low borderline
Sole01G0007140 Steroid DET2 low borderline
Sole02G0003940 Steroid DET2 medium pass
Sole04G0009040 Steroid DET2 low borderline
Sole04G0016060 Steroid DET2 medium pass
SoleSpoScf_011270030190 Steroid DET2 low borderline
Sole02G0010080 Steroid DWF1 medium pass
Sole04G0024620 Steroid DWF1 medium pass
Sole01G0000030 Steroid DWF4/CYP90B1 low borderline
Sole01G0007620 Steroid DWF4/CYP90B1 medium borderline
Sole01G0011630 Steroid DWF4/CYP90B1 medium borderline
Sole01G0013980 Steroid DWF4/CYP90B1 medium pass
Sole01G0015360 Steroid DWF4/CYP90B1 medium borderline
Sole01G0020850 Steroid DWF4/CYP90B1 low borderline
Sole01G0020910 Steroid DWF4/CYP90B1 low borderline
Sole01G0020960 Steroid DWF4/CYP90B1 low borderline
Sole01G0021210 Steroid DWF4/CYP90B1 low borderline
Sole01G0021220 Steroid DWF4/CYP90B1 low borderline
Sole01G0021500 Steroid DWF4/CYP90B1 low borderline
Sole01G0022030 Steroid DWF4/CYP90B1 low borderline
Sole01G0026810 Steroid DWF4/CYP90B1 low borderline
Sole01G0027940 Steroid DWF4/CYP90B1 low borderline
Sole02G0012120 Steroid DWF4/CYP90B1 low borderline
Sole02G0012130 Steroid DWF4/CYP90B1 low borderline
Sole02G0012180 Steroid DWF4/CYP90B1 low borderline
Sole02G0012200 Steroid DWF4/CYP90B1 low borderline
Sole02G0012210 Steroid DWF4/CYP90B1 low borderline
Sole02G0015330 Steroid DWF4/CYP90B1 low borderline
Sole02G0015360 Steroid DWF4/CYP90B1 low borderline
Sole02G0015390 Steroid DWF4/CYP90B1 low borderline
Sole02G0019450 Steroid DWF4/CYP90B1 low borderline
Sole02G0019460 Steroid DWF4/CYP90B1 low borderline
Sole02G0022090 Steroid DWF4/CYP90B1 medium borderline
Sole02G0022480 Steroid DWF4/CYP90B1 medium pass
Sole02G0022500 Steroid DWF4/CYP90B1 low borderline
Sole02G0022560 Steroid DWF4/CYP90B1 medium borderline
Sole02G0022740 Steroid DWF4/CYP90B1 medium borderline
Sole03G0003830 Steroid DWF4/CYP90B1 low borderline
Sole03G0003840 Steroid DWF4/CYP90B1 low borderline
Sole03G0006900 Steroid DWF4/CYP90B1 low borderline
Sole03G0015580 Steroid DWF4/CYP90B1 low borderline