PlantSME Plant secondary metabolism enzyme database

Spinacia oleracea (spinacia_oleracea)

Imported from atlas release summary for Spinacia oleracea.

1657
Candidate Protein Records
1347
Pathway-Level Records
3352
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 388 20 BAHD (143) View species results
Phenylpropanoid pathway 319 11 POD (170) View species results
Alkaloid pathway 267 18 7DLGT (52) View species results
Flavonoid pathway 188 11 UFGT (120) View species results
Rosmarinic acid pathway 117 7 C4H (44) View species results
Steroid pathway 68 13 SMT1/SMT2/SMT3 (25) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 1223 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 262 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
SoleSpoScf_017230047270 Flavonoid F3H medium borderline
SoleSpoScf_017770048800 Flavonoid F3H medium borderline
SoleSpoScf_019290051850 Flavonoid F3H medium borderline
SoleSpoScf_024210061090 Flavonoid F3H medium borderline
SoleSpoScf_026950065250 Flavonoid F3H low borderline
SoleSpoScf_027610066190 Flavonoid F3H medium borderline
SoleSpoScf_033240070970 Flavonoid F3H medium borderline
SoleSpoScf_035200071900 Flavonoid F3H medium borderline
SoleSpoScf_040440074540 Flavonoid F3H medium borderline
SoleSpoScf_058470078100 Flavonoid F3H low borderline
SoleSpoScf_012800035510 Flavonoid FLS low borderline
SoleSpoScf_017230047280 Flavonoid FLS medium borderline
SoleSpoScf_034910071700 Flavonoid FLS low borderline
Sole02G0015350 Flavonoid FNS medium borderline
Sole02G0021330 Flavonoid FNS medium borderline
Sole03G0006020 Flavonoid FNS medium borderline
Sole03G0015580 Flavonoid FNS medium borderline
Sole03G0026590 Flavonoid FNS medium borderline
Sole05G0002210 Flavonoid FNS medium borderline
Sole05G0011140 Flavonoid FNS medium borderline
SoleSpoScf_006760016670 Flavonoid FNS medium borderline
SoleSpoScf_009400024060 Flavonoid FNS medium borderline
SoleSpoScf_020050053220 Flavonoid FNS medium borderline
SoleSpoScf_021140055530 Flavonoid FNS medium borderline
SoleSpoScf_031290069570 Flavonoid FNS medium borderline
SoleSpoScf_043210075340 Flavonoid FNS low borderline
SoleSpoScf_112350080090 Flavonoid FNS medium borderline
Sole01G0001930 Flavonoid IFR low borderline
Sole01G0015470 Flavonoid IFR low borderline
Sole01G0015690 Flavonoid IFR low borderline
Sole04G0003190 Flavonoid IFR low borderline
Sole04G0005480 Flavonoid IFR low borderline
Sole04G0013330 Flavonoid IFR low borderline
Sole04G0021470 Flavonoid IFR high pass
Sole04G0021480 Flavonoid IFR high pass
Sole04G0026130 Flavonoid IFR medium pass
Sole05G0010260 Flavonoid IFR high pass
Sole05G0014040 Flavonoid IFR low borderline
Sole06G0006590 Flavonoid IFR low borderline
Sole06G0014170 Flavonoid IFR low borderline
Sole06G0019770 Flavonoid IFR low borderline
Sole06G0021520 Flavonoid IFR high pass
Sole06G0021530 Flavonoid IFR medium pass
SoleSpoScf_003610007530 Flavonoid IFR low borderline
SoleSpoScf_011820032290 Flavonoid IFR low borderline
SoleSpoScf_015090042120 Flavonoid IFR low borderline
SoleSpoScf_016110044920 Flavonoid IFR low borderline
SoleSpoScf_021770056650 Flavonoid IFR medium borderline
SoleSpoScf_022920058770 Flavonoid IFR medium pass
SoleSuper_scaffold_1220085300 Flavonoid IFR low borderline