PlantSME Plant secondary metabolism enzyme database

Arabidopsis suecica (arabidopsis_suecica)

Imported from atlas release summary for Arabidopsis suecica.

3434
Candidate Protein Records
2799
Pathway-Level Records
6872
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 847 19 BAHD (382) View species results
Alkaloid pathway 618 19 SGD (119) View species results
Phenylpropanoid pathway 580 11 POD (265) View species results
Flavonoid pathway 318 12 UFGT (202) View species results
Rosmarinic acid pathway 226 7 C4H (90) View species results
Steroid pathway 210 13 SMT1/SMT2/SMT3 (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2620 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
ara_suecica_KAG7631918.1 Alkaloid T16H medium borderline
ara_suecica_KAG7631919.1 Alkaloid T16H medium borderline
ara_suecica_KAG7631920.1 Alkaloid T16H medium borderline
ara_suecica_KAG7631921.1 Alkaloid T16H medium borderline
ara_suecica_KAG7631924.1 Alkaloid T16H medium borderline
ara_suecica_KAG7632021.1 Alkaloid T16H medium borderline
ara_suecica_KAG7632023.1 Alkaloid T16H medium borderline
ara_suecica_KAG7632024.1 Alkaloid T16H medium borderline
ara_suecica_KAG7632498.1 Alkaloid T16H medium borderline
ara_suecica_KAG7633679.1 Alkaloid T16H medium borderline
ara_suecica_KAG7633681.1 Alkaloid T16H medium borderline
ara_suecica_KAG7633941.1 Alkaloid T16H medium borderline
ara_suecica_KAG7640300.1 Alkaloid T16H medium borderline
ara_suecica_KAG7642214.1 Alkaloid T16H medium borderline
ara_suecica_KAG7642426.1 Alkaloid T16H medium borderline
ara_suecica_KAG7642427.1 Alkaloid T16H medium borderline
ara_suecica_KAG7642597.1 Alkaloid T16H medium borderline
ara_suecica_KAG7642631.1 Alkaloid T16H medium borderline
ara_suecica_KAG7642633.1 Alkaloid T16H medium borderline
ara_suecica_KAG7643087.1 Alkaloid T16H medium borderline
ara_suecica_KAG7643088.1 Alkaloid T16H medium borderline
ara_suecica_KAG7652680.1 Alkaloid T16H medium borderline
ara_suecica_KAG7653939.1 Alkaloid T16H medium borderline
ara_suecica_KAG7654113.1 Alkaloid T16H low borderline
ara_suecica_KAG7655763.1 Alkaloid T16H medium borderline
ara_suecica_KAG7658464.1 Alkaloid T16H medium borderline
ara_suecica_KAG7536337.1 Alkaloid T3O medium pass
ara_suecica_KAG7536338.1 Alkaloid T3O medium pass
ara_suecica_KAG7536428.1 Alkaloid T3O medium borderline
ara_suecica_KAG7536471.1 Alkaloid T3O medium borderline
ara_suecica_KAG7538532.1 Alkaloid T3O medium borderline
ara_suecica_KAG7539046.1 Alkaloid T3O low borderline
ara_suecica_KAG7544504.1 Alkaloid T3O medium borderline
ara_suecica_KAG7544727.1 Alkaloid T3O medium borderline
ara_suecica_KAG7544732.1 Alkaloid T3O medium borderline
ara_suecica_KAG7544733.1 Alkaloid T3O medium borderline
ara_suecica_KAG7544736.1 Alkaloid T3O medium borderline
ara_suecica_KAG7544737.1 Alkaloid T3O medium borderline
ara_suecica_KAG7544861.1 Alkaloid T3O medium pass
ara_suecica_KAG7544869.1 Alkaloid T3O medium borderline
ara_suecica_KAG7545396.1 Alkaloid T3O medium pass
ara_suecica_KAG7545423.1 Alkaloid T3O medium borderline
ara_suecica_KAG7546815.1 Alkaloid T3O medium borderline
ara_suecica_KAG7546816.1 Alkaloid T3O medium borderline
ara_suecica_KAG7546928.1 Alkaloid T3O medium pass
ara_suecica_KAG7547473.1 Alkaloid T3O medium borderline
ara_suecica_KAG7547481.1 Alkaloid T3O medium pass
ara_suecica_KAG7547482.1 Alkaloid T3O medium pass
ara_suecica_KAG7547560.1 Alkaloid T3O medium pass
ara_suecica_KAG7547726.1 Alkaloid T3O medium borderline