PlantSME Plant secondary metabolism enzyme database

Arabidopsis suecica (arabidopsis_suecica)

Imported from atlas release summary for Arabidopsis suecica.

3434
Candidate Protein Records
2799
Pathway-Level Records
6872
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 847 19 BAHD (382) View species results
Alkaloid pathway 618 19 SGD (119) View species results
Phenylpropanoid pathway 580 11 POD (265) View species results
Flavonoid pathway 318 12 UFGT (202) View species results
Rosmarinic acid pathway 226 7 C4H (90) View species results
Steroid pathway 210 13 SMT1/SMT2/SMT3 (85) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 2620 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 541 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
ara_suecica_KAG7548168.1 Alkaloid T3O medium pass
ara_suecica_KAG7548472.1 Alkaloid T3O medium pass
ara_suecica_KAG7548492.1 Alkaloid T3O medium pass
ara_suecica_KAG7554074.1 Alkaloid T3O medium borderline
ara_suecica_KAG7554230.1 Alkaloid T3O medium pass
ara_suecica_KAG7554539.1 Alkaloid T3O medium borderline
ara_suecica_KAG7554568.1 Alkaloid T3O low borderline
ara_suecica_KAG7554751.1 Alkaloid T3O medium borderline
ara_suecica_KAG7555246.1 Alkaloid T3O medium pass
ara_suecica_KAG7556187.1 Alkaloid T3O medium pass
ara_suecica_KAG7556414.1 Alkaloid T3O medium borderline
ara_suecica_KAG7556431.1 Alkaloid T3O medium borderline
ara_suecica_KAG7556432.1 Alkaloid T3O medium borderline
ara_suecica_KAG7556436.1 Alkaloid T3O medium borderline
ara_suecica_KAG7557524.1 Alkaloid T3O medium borderline
ara_suecica_KAG7558119.1 Alkaloid T3O low borderline
ara_suecica_KAG7563583.1 Alkaloid T3O medium borderline
ara_suecica_KAG7563584.1 Alkaloid T3O medium borderline
ara_suecica_KAG7563585.1 Alkaloid T3O medium borderline
ara_suecica_KAG7563586.1 Alkaloid T3O medium borderline
ara_suecica_KAG7563587.1 Alkaloid T3O medium borderline
ara_suecica_KAG7563588.1 Alkaloid T3O medium borderline
ara_suecica_KAG7563589.1 Alkaloid T3O medium borderline
ara_suecica_KAG7563590.1 Alkaloid T3O medium borderline
ara_suecica_KAG7563591.1 Alkaloid T3O medium borderline
ara_suecica_KAG7563592.1 Alkaloid T3O medium borderline
ara_suecica_KAG7563593.1 Alkaloid T3O medium borderline
ara_suecica_KAG7563594.1 Alkaloid T3O medium borderline
ara_suecica_KAG7563596.1 Alkaloid T3O medium borderline
ara_suecica_KAG7563598.1 Alkaloid T3O medium borderline
ara_suecica_KAG7563599.1 Alkaloid T3O medium borderline
ara_suecica_KAG7563600.1 Alkaloid T3O medium borderline
ara_suecica_KAG7563983.1 Alkaloid T3O low borderline
ara_suecica_KAG7564058.1 Alkaloid T3O medium pass
ara_suecica_KAG7564112.1 Alkaloid T3O medium pass
ara_suecica_KAG7564126.1 Alkaloid T3O medium pass
ara_suecica_KAG7564885.1 Alkaloid T3O medium borderline
ara_suecica_KAG7564886.1 Alkaloid T3O medium borderline
ara_suecica_KAG7564888.1 Alkaloid T3O medium borderline
ara_suecica_KAG7564890.1 Alkaloid T3O medium borderline
ara_suecica_KAG7564915.1 Alkaloid T3O low borderline
ara_suecica_KAG7565514.1 Alkaloid T3O medium borderline
ara_suecica_KAG7565515.1 Alkaloid T3O medium borderline
ara_suecica_KAG7565938.1 Alkaloid T3O low borderline
ara_suecica_KAG7566246.1 Alkaloid T3O medium borderline
ara_suecica_KAG7571977.1 Alkaloid T3O medium borderline
ara_suecica_KAG7572617.1 Alkaloid T3O medium borderline
ara_suecica_KAG7572940.1 Alkaloid T3O medium pass
ara_suecica_KAG7573363.1 Alkaloid T3O medium pass
ara_suecica_KAG7574428.1 Alkaloid T3O medium borderline