PlantSME Plant secondary metabolism enzyme database

Barbula amplexifolia (barbula_amplexifolia)

Imported from atlas release summary for Barbula amplexifolia.

691
Candidate Genes
103
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Bryophytes
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (95)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Phenylpropanoid pathway 180 12 POD (89) View species results
Terpenoid pathway 152 19 BAHD (64) View species results
Alkaloid pathway 132 19 PYKS (28) View species results
Flavonoid pathway 107 11 PAL (27) View species results
Rosmarinic acid pathway 81 7 PAL (27) View species results
Steroid pathway 39 12 CAS (13) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 604 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 113 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Gene Pathway Family Confidence Status
BAampscaffold_70209200 Steroid CAS medium pass
BAampscaffold_70218140 Steroid CAS medium pass
BAampscaffold_70218210 Steroid CAS medium pass
BAampscaffold_80231330 Steroid CAS medium pass
BAampscaffold_90241870 Steroid CAS medium pass
BAampscaffold_10007050 Steroid CPD/CYP90A1 low borderline
BAampscaffold_40140850 Steroid CPD/CYP90A1 medium borderline
BAampscaffold_50165700 Steroid CPD/CYP90A1 medium borderline
BAampscaffold_50173870 Steroid CPD/CYP90A1 medium borderline
BAampscaffold_70209820 Steroid CPD/CYP90A1 medium borderline
BAampscaffold_90245640 Steroid CPD/CYP90A1 medium borderline
BAampscaffold_90247240 Steroid CPD/CYP90A1 low borderline
BAampscaffold_100009990 Steroid CPI1 high pass
BAampscaffold_130074290 Steroid CYP51G1 medium borderline
BAampscaffold_30130020 Steroid CYP51G1 medium borderline
BAampscaffold_100012650 Steroid CYP90D1 low borderline
BAampscaffold_110039800 Steroid CYP90D1 low borderline
BAampscaffold_120049250 Steroid CYP90D1 low borderline
BAampscaffold_130062470 Steroid CYP90D1 low borderline
BAampscaffold_130067430 Steroid CYP90D1 low borderline
BAampscaffold_20091260 Steroid CYP90D1 low borderline
BAampscaffold_20097450 Steroid CYP90D1 low borderline
BAampscaffold_30125350 Steroid CYP90D1 low borderline
BAampscaffold_70214510 Steroid CYP90D1 low borderline
BAampscaffold_80221740 Steroid CYP90D1 low borderline
BAampscaffold_100017570 Steroid DET2 low borderline
BAampscaffold_10009100 Steroid DET2 medium pass
BAampscaffold_20112040 Steroid DET2 low borderline
BAampscaffold_140079530 Steroid DWF1 low borderline
BAampscaffold_50165710 Steroid DWF1 medium pass
BAampscaffold_100010970 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_110039950 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_110042880 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_120046170 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_120046900 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_120048320 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_120049200 Steroid DWF4/CYP90B1 medium borderline
BAampscaffold_120049310 Steroid DWF4/CYP90B1 medium borderline
BAampscaffold_120052760 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_120052920 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_120057840 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_120058100 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_130066360 Steroid DWF4/CYP90B1 medium borderline
BAampscaffold_20092800 Steroid DWF4/CYP90B1 medium borderline
BAampscaffold_20099150 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_20099480 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_20117260 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_30136790 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_40153210 Steroid DWF4/CYP90B1 low borderline
BAampscaffold_50155170 Steroid DWF4/CYP90B1 low borderline